Research Output 1995 2019

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Conference contribution
2018

A sparse-to-dense method for 3D optical flow estimation in 3D light-microscopy image sequences

Manandhar, S., Bouthemy, P., Welf, E., Roudot, P. & Kervrann, C., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 952-956 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical flows
Optical microscopy
Microscopy
Interpolation
Light
2008

A control engineering model for hemostasis following blood vessel injury

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Blood vessels

Computational investigation of how integrin clustering affects cell adhesion and migration

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell adhesion
Integrins

Experimental investigation of the relationship between integrin clustering and focal adhesion kinase phosphorylation

Welf, E. S., Ogunnaike, B. A. & Naik, U. P., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Focal Adhesion Protein-Tyrosine Kinases
Phosphorylation
Integrins
Adhesion

Quantitative analysis of border cell migration

Chen, S. C. & Danuser, G., 2008, Conference Record - Asilomar Conference on Signals, Systems and Computers. p. 56-60 5 p. 5074360

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chemical analysis
Image analysis
Support vector machines
Classifiers
Experiments
2006
2 Citations (Scopus)

Computer vision for systems biology

Danuser, G., 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. Vol. 2006. p. 241-244 4 p. 1624897

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer vision
Biological systems
Systems Biology
2005

A diffusion-reaction model for integrin clustering in response to cell adhesion

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2005, 05AIChE: 2005 AIChE Annual Meeting and Fall Showcase, Conference Proceedings. p. 8487-8494 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell adhesion
2004

Measurement of the strain field in a micrometer-sized region at a notch tip

Mazza, E., Dual, J., Musil, C. R., Danuser, G. & Vetterli, M., 2004, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 2782. p. 160-168 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Notch
notches
micrometers
boxes
ion microscopes
4 Citations (Scopus)

Observing deformations of 20 nanometer with a low-numerical-aperture light microscope

Danuser, G. & Mazza, E., 2004, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 2782. p. 180-191 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

numerical aperture
Microscope
Microscopes
microscopes
micrometers
1 Citation (Scopus)

Super-resolution tracking of weak fluorescent markers in 3D: Application in dissecting the mechanics of chromosome segregation using fluorescence imaging and molecular genetics in yeast

Danuser, G., 2004, 2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano. Vol. 1. p. 61-64 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chromosomes
Yeast
Optical microscopy
Microscopic examination
Mechanics
2001
1 Citation (Scopus)

One-step calibration of specimen induced focal shifts and spherical aberration for quantitative 3D microscopy: Approach and first results

Thomann, D., Stüssi, E. & Danuser, G., 2001, Proceedings of SPIE - The International Society for Optical Engineering. Conchello, J., Cogswell, C. J. & Wilson, T. (eds.). Vol. 4261. p. 69-80 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Aberrations
aberration
Optical transfer function
Microscopic examination
Calibration
2000
4 Citations (Scopus)

Super-resolution stereo light microscopy for real-time tasks using normal flow and geometric constraints

Danuser, G., 2000, Proceedings of SPIE - The International Society for Optical Engineering. Society of Photo-Optical Instrumentation Engineers, Vol. 3919. p. 129-140 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

pipettes
Deconvolution
Latexes
Imaging systems
Computer vision
1997
11 Citations (Scopus)

Deformable multi template matching with application to portal images

Berger, M. & Danuser, G., 1997, Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. Anon (ed.). p. 374-379 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Template matching
Feature extraction
Image matching
Radiotherapy
Quality control
1995
12 Citations (Scopus)

Calibration procedure for light-optical and scanning electron stereo-microscopy in micro- and nanorobotics

Danuser, G. & Kuebler, O., 1995, Proceedings of SPIE - The International Society for Optical Engineering. Wilson, T. & Cogswell, C. J. (eds.). Vol. 2412. p. 174-185 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanorobotics
Microscopic examination
Calibration
microscopy
Scanning