Research Output

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Review article
2020

Karyopherins and condensates

Springhower, C. E., Rosen, M. K. & Chook, Y. M., Jun 2020, In : Current Opinion in Cell Biology. 64, p. 112-123 12 p.

Research output: Contribution to journalReview article

Open Access

Progress in nicotinic receptor structural biology

Gharpure, A., Noviello, C. M. & Hibbs, R. E., Jul 2020, In : Neuropharmacology. 171, 108086.

Research output: Contribution to journalReview article

Recent advances suggest increased influence of selective pressure in allostery

Bhat, A. S., Dustin Schaeffer, R., Kinch, L., Medvedev, K. E. & Grishin, N. V., Jun 2020, In : Current Opinion in Structural Biology. 62, p. 183-188 6 p.

Research output: Contribution to journalReview article

Spatial compartmentalization of lipid droplet biogenesis

Henne, M., Goodman, J. M. & Hariri, H., Jan 1 2020, In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1865, 1, 158499.

Research output: Contribution to journalReview article

2 Scopus citations

Strategies for Engineering and Rewiring Kinase Regulation

McCormick, J. W., Pincus, D., Resnekov, O. & Reynolds, K. A., Mar 2020, In : Trends in biochemical sciences. 45, 3, p. 259-271 13 p.

Research output: Contribution to journalReview article

Structures and Mechanisms in the cGAS-STING Innate Immunity Pathway

Zhang, X., Bai, X. C. & Chen, Z. J., Jul 14 2020, In : Immunity. 53, 1, p. 43-53 11 p.

Research output: Contribution to journalReview article

2019

And three's a party: lysosomes, lipid droplets, and the ER in lipid trafficking and cell homeostasis

Henne, M., Aug 2019, In : Current Opinion in Cell Biology. 59, p. 40-49 10 p.

Research output: Contribution to journalReview article

Open Access
6 Scopus citations

Regulation of Transmembrane Signaling by Phase Separation

Case, L. B., Ditlev, J. A. & Rosen, M. K., May 6 2019, In : Annual Review of Biophysics. 48, p. 465-494 30 p.

Research output: Contribution to journalReview article

16 Scopus citations
2018

A new look for the growing microtubule end?

Rice, L. M., Aug 1 2018, In : Journal of Cell Biology. 217, 8, p. 2609-2611 3 p.

Research output: Contribution to journalReview article

1 Scopus citations

A new species of Wahydra from Ecuador (Hesperiidae, Hesperiinae, Anthoptini)

Carneiro, E., Dolibaina, D. R., Grishin, N. V. & Warren, A. D., Mar 8 2018, In : Zootaxa. 4392, 1, p. 196-200 5 p.

Research output: Contribution to journalReview article

2 Scopus citations

Karyopherins in cancer

Çağatay, T. & Chook, Y. M., Jun 1 2018, In : Current Opinion in Cell Biology. 52, p. 30-42 13 p.

Research output: Contribution to journalReview article

15 Scopus citations

The assembly of lipid droplets and their roles in challenged cells

Henne, W. M., Reese, M. L. & Goodman, J. M., Jun 15 2018, In : EMBO Journal. 37, 12, e98947.

Research output: Contribution to journalReview article

45 Scopus citations
2017

A cascade of multiple proteins and lipids catalyzes membrane fusion

Wickner, W. & Rizo-Rey, J., Mar 15 2017, In : Molecular Biology of the Cell. 28, 6, p. 707-711 5 p.

Research output: Contribution to journalReview article

37 Scopus citations

Discovery and Roles of ER-Endolysosomal Contact Sites in Disease

Henne, W. M., Jan 1 2017, In : Advances in Experimental Medicine and Biology. 997, p. 135-147 13 p.

Research output: Contribution to journalReview article

6 Scopus citations
2016

Classification of proteins with shared motifs and internal repeats in the ECOD database

Schaeffer, R. D., Kinch, L. N., Liao, Y. & Grishin, N. V., Jul 1 2016, In : Protein Science. p. 1188-1203 16 p.

Research output: Contribution to journalReview article

10 Scopus citations

Inter-organelle ER-endolysosomal contact sites in metabolism and disease across evolution

Hariri, H., Ugrankar, R., Liu, Y. & Henne, W. M., May 3 2016, In : Communicative and Integrative Biology. 9, 3

Research output: Contribution to journalReview article

18 Scopus citations
2015

How cryo-EM is revolutionizing structural biology

Bai, X. C., McMullan, G. & Scheres, S. H. W., Jan 1 2015, In : Trends in Biochemical Sciences. 40, 1, p. 49-57 9 p.

Research output: Contribution to journalReview article

354 Scopus citations
2014

Atomic basis of CRM1-cargo recognition, release and inhibition

Fung, H. Y. J. & Chook, Y. M., Aug 2014, In : Seminars in Cancer Biology. 27, p. 52-61 10 p.

Research output: Contribution to journalReview article

64 Scopus citations

MAP kinase modules: The excursion model and the steps that count

Piala, A. T., Humphreys, J. M. & Goldsmith, E. J., Nov 4 2014, In : Biophysical journal. 107, 9, p. 2006-2015 10 p.

Research output: Contribution to journalReview article

15 Scopus citations
2013

Bioinformatics perspective on rhomboid intramembrane protease evolution and function

Kinch, L. N. & Grishin, N. V., Jul 24 2013, In : Biochimica et Biophysica Acta - Biomembranes. 1828, 12, p. 2937-2943 7 p.

Research output: Contribution to journalReview article

16 Scopus citations

RNA polymerase II transcription: Structure and mechanism

Liu, X., Bushnell, D. A. & Kornberg, R. D., Jan 1 2013, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1829, 1, p. 2-8 7 p.

Research output: Contribution to journalReview article

66 Scopus citations
2012

Enlightening molecular mechanisms through study of protein interactions

Rizo-Rey, J., Rosen, M. K. & Gardner, K. H., Oct 2012, In : Journal of molecular cell biology. 4, 5, p. 270-283 14 p.

Research output: Contribution to journalReview article

16 Scopus citations

NESdb: A database of NES-containing CRM1 cargoes

Xu, D., Grishin, N. V. & Chook, Y. M., Sep 15 2012, In : Molecular biology of the cell. 23, 18, p. 3673-3676 4 p.

Research output: Contribution to journalReview article

87 Scopus citations

Regulation from within: The cytoskeleton in transmembrane signaling

Jaqaman, K. & Grinstein, S., Oct 1 2012, In : Trends in Cell Biology. 22, 10, p. 515-526 12 p.

Research output: Contribution to journalReview article

56 Scopus citations
2011

Catalytic Control in the EGF Receptor and Its Connection to General Kinase Regulatory Mechanisms

Jura, N., Zhang, X., Endres, N. F., Seeliger, M. A., Schindler, T. & Kuriyan, J., Apr 8 2011, In : Molecular cell. 42, 1, p. 9-22 14 p.

Research output: Contribution to journalReview article

205 Scopus citations

Evaluating the stoichiometry of macromolecular complexes using multisignal sedimentation velocity

Padrick, S. B. & Brautigam, C. A., May 1 2011, In : Methods. 54, 1, p. 39-55 17 p.

Research output: Contribution to journalReview article

20 Scopus citations

Nuclear import by karyopherin-βs: Recognition and inhibition

Chook, Y. M. & Süel, K. E., Sep 1 2011, In : Biochimica et Biophysica Acta - Molecular Cell Research. 1813, 9, p. 1593-1606 14 p.

Research output: Contribution to journalReview article

223 Scopus citations

Protein folds and protein folding

Schaeffer, R. D. & Daggett, V., Jan 1 2011, In : Protein Engineering, Design and Selection. 24, 1-2, p. 11-19 9 p.

Research output: Contribution to journalReview article

28 Scopus citations

The ESCRT Pathway

Henne, W. M., Buchkovich, N. J. & Emr, S. D., Jul 19 2011, In : Developmental cell. 21, 1, p. 77-91 15 p.

Research output: Contribution to journalReview article

659 Scopus citations

Three-dimensional docking in the MAPK p38α

Goldsmith, E. J., Dec 20 2011, In : Science Signaling. 4, 204, pe47.

Research output: Contribution to journalReview article

8 Scopus citations
32 Scopus citations
2010

At the junction of SNARE and SM protein function

Carr, C. M. & Rizo-Rey, J., Aug 2010, In : Current Opinion in Cell Biology. 22, 4, p. 488-495 8 p.

Research output: Contribution to journalReview article

120 Scopus citations

Dynameomics: Protein dynamics and unfolding across fold space

Jonsson, A. L., Schaeffer, R. D., Van Der Kamp, M. W. & Daggett, V., Dec 1 2010, In : Biomolecular Concepts. 1, 5-6, p. 335-344 10 p.

Research output: Contribution to journalReview article

1 Scopus citations

Physical mechanisms of signal integration by WASP family proteins

Padrick, S. B. & Rosen, M. K., Jul 7 2010, In : Annual Review of Biochemistry. 79, p. 707-735 29 p.

Research output: Contribution to journalReview article

163 Scopus citations

Recognition of nuclear targeting signals by Karyopherin-β proteins

Xu, D., Farmer, A. & Chook, Y. M., Dec 1 2010, In : Current Opinion in Structural Biology. 20, 6, p. 782-790 9 p.

Research output: Contribution to journalReview article

140 Scopus citations

To automate or not to automate: This is the question

Cymborowski, M., Klimecka, M., Chruszcz, M., Zimmerman, M. D., Shumilin, I. A., Borek, D., Lazarski, K., Joachimiak, A., Otwinowski, Z., Anderson, W. & Minor, W., Sep 1 2010, In : Journal of Structural and Functional Genomics. 11, 3, p. 211-221 11 p.

Research output: Contribution to journalReview article

20 Scopus citations
2009

Discrete-continuous duality of protein structure space

Sadreyev, R. I., Kim, B. H. & Grishin, N. V., Jun 1 2009, In : Current Opinion in Structural Biology. 19, 3, p. 321-328 8 p.

Research output: Contribution to journalReview article

51 Scopus citations

Polarization effects in molecular mechanical force fields

Cieplak, P., Dupradeau, F. Y., Duan, Y. & Wang, J., Sep 21 2009, In : Journal of Physics Condensed Matter. 21, 33, 333102.

Research output: Contribution to journalReview article

205 Scopus citations

Recent developments of in silico predictions of intestinal absorption and oral bioavailability

Hou, T., Li, Y., Zhang, W. & Wang, J., Jun 1 2009, In : Combinatorial Chemistry and High Throughput Screening. 12, 5, p. 497-506 10 p.

Research output: Contribution to journalReview article

67 Scopus citations

The ErbB kinase domain: Structural perspectives into kinase activation and inhibition

Bose, R. & Zhang, X., Feb 15 2009, In : Experimental Cell Research. 315, 4, p. 649-658 10 p.

Research output: Contribution to journalReview article

49 Scopus citations

The structure and function of G-protein-coupled receptors

Rosenbaum, D. M., Rasmussen, S. G. F. & Kobilka, B. K., May 21 2009, In : Nature. 459, 7245, p. 356-363 8 p.

Research output: Contribution to journalReview article

1257 Scopus citations
2008

Combining experiment and simulation in protein folding: closing the gap for small model systems

Schaeffer, R. D., Fersht, A. & Daggett, V., Feb 1 2008, In : Current Opinion in Structural Biology. 18, 1, p. 4-9 6 p.

Research output: Contribution to journalReview article

79 Scopus citations

Program review: Molecular biophysics at UT Southwestern Medical Center: Strength through breadth

Gardner, K. H., Apr 1 2008, In : Biopolymers. 89, 4, p. 244-247 4 p.

Research output: Contribution to journalReview article

Structure-ADME relationship: Still a long way to go?

Hou, T. & Wang, J., Jun 1 2008, In : Expert Opinion on Drug Metabolism and Toxicology. 4, 6, p. 759-770 12 p.

Research output: Contribution to journalReview article

97 Scopus citations

Synaptic vesicle fusion

Rizo-Rey, J. & Rosenmund, C., Jul 1 2008, In : Nature Structural and Molecular Biology. 15, 7, p. 665-674 10 p.

Research output: Contribution to journalReview article

371 Scopus citations

The septin family of GTPases: Architecture and dynamics

Weirich, C. S., Erzberger, J. P. & Barral, Y., Jun 10 2008, In : Nature Reviews Molecular Cell Biology. 9, 6, p. 478-489 12 p.

Research output: Contribution to journalReview article

229 Scopus citations
2007

ADME evaluation in drug discovery. 6. Can oral biavailability in humans be effectively predicted by simple molecular property-based rules?

Hou, T., Wang, J., Zhang, W. & Xu, X., Mar 1 2007, In : Journal of Chemical Information and Modeling. 47, 2, p. 460-463 4 p.

Research output: Contribution to journalReview article

124 Scopus citations

Structural genomics: keeping up with expanding knowledge of the protein universe

Grabowski, M., Joachimiak, A., Otwinowski, Z. & Minor, W., Jun 1 2007, In : Current Opinion in Structural Biology. 17, 3, p. 347-353 7 p.

Research output: Contribution to journalReview article

33 Scopus citations

Substrate and docking interactions in serine/threonine protein kinases

Goldsmith, E. J., Akella, R., Min, X., Zhou, T. & Humphreys, J. M., Nov 1 2007, In : Chemical Reviews. 107, 11, p. 5065-5081 17 p.

Research output: Contribution to journalReview article

88 Scopus citations

The peptidoglycan recognition proteins LCa and LCx

Chang, C. I. & Deisenhofer, J., Jun 1 2007, In : Cellular and Molecular Life Sciences. 64, 11, p. 1395-1402 8 p.

Research output: Contribution to journalReview article

4 Scopus citations