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2020

Consensus-based technical recommendations for clinical translation of renal ASL MRI

Nery, F., Buchanan, C. E., Harteveld, A. A., Odudu, A., Bane, O., Cox, E. F., Derlin, K., Gach, H. M., Golay, X., Gutberlet, M., Laustsen, C., Ljimani, A., Madhuranthakam, A. J., Pedrosa, I., Prasad, P. V., Robson, P. M., Sharma, K., Sourbron, S., Taso, M., Thomas, D. L. & 6 others, Wang, D. J. J., Zhang, J. L., Alsop, D. C., Fain, S. B., Francis, S. T. & Fernández-Seara, M. A., Feb 1 2020, In : Magnetic Resonance Materials in Physics, Biology and Medicine. 33, 1, p. 141-161 21 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Gliomas Interact with Non-glioma Brain Cells via Extracellular Vesicles

Gao, X., Zhang, Z., Mashimo, T., Shen, B., Nyagilo, J., Wang, H., Wang, Y., Liu, Z., Mulgaonkar, A., Hu, X. L., Piccirillo, S. G. M., Eskiocak, U., Davé, D. P., Qin, S., Yang, Y., Sun, X., Fu, Y. X., Zong, H., Sun, W., Bachoo, R. M. & 1 others, Ge, W. P., Feb 25 2020, In : Cell Reports. 30, 8, p. 2489-2500.e5

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Hyperspectral imaging for the detection of glioblastoma tumor cells in h&e slides using convolutional neural networks

Ortega, S., Halicek, M., Fabelo, H., Camacho, R., Plaza De La Luz, M., Godtliebsen, F., Callicó, G. M. & Fei, B., Apr 1 2020, In : Sensors (Switzerland). 20, 7, 1911.

Research output: Contribution to journalArticle

Open Access

Injectable Click Chemistry-based Bioadhesives for Accelerated Wound Closure

Li, S., Zhou, J., Huang, Y. H., Roy, J., Zhou, N., Yum, K., Sun, X. & Tang, L., Jan 1 2020, (Accepted/In press) In : Acta Biomaterialia.

Research output: Contribution to journalArticle

PET imaging of occult tumours by temporal integration of tumour-acidosis signals from pH-sensitive 64Cu-labelled polymers

Huang, G., Zhao, T., Wang, C., Nham, K., Xiong, Y., Gao, X., Wang, Y., Hao, G., Ge, W. P., Sun, X., Sumer, B. D. & Gao, J., Mar 1 2020, In : Nature Biomedical Engineering. 4, 3, p. 314-324 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Phase Asymmetry Ultrasound Despeckling with Fractional Anisotropic Diffusion and Total Variation

Mei, K., Hu, B., Fei, B. & Qin, B., Jan 1 2020, In : IEEE Transactions on Image Processing. 29, p. 2845-2859 15 p., 8906234.

Research output: Contribution to journalArticle

2019

18F-fluciclovine parameters on targeted prostate biopsy associated with true positivity in recurrent prostate cancer

Abiodun-Ojo, O. A., Akintayo, A. A., Akin-Akintayo, O. O., Tade, F. I., Nieh, P. T., Master, V. A., Alemozaffar, M., Osunkoya, A. O., Goodman, M. M., Fei, B. & Schuster, D. M., Jan 1 2019, In : Journal of Nuclear Medicine. 60, 11, p. 1531-1536 6 p.

Research output: Contribution to journalArticle

Classification of brain tumor isocitrate dehydrogenase status using MRI and deep learning

Nalawade, S., Murugesan, G. K., Vejdani-Jahromi, M., Fisicaro, R. A., Bangalore Yogananda, C. G., Wagner, B., Mickey, B., Maher, E., Pinho, M. C., Fei, B., Madhuranthakam, A. J. & Maldjian, J. A., Oct 1 2019, In : Journal of Medical Imaging. 6, 4, 046003.

Research output: Contribution to journalArticle

Deep learning-based framework for In Vivo identification of glioblastoma tumor using hyperspectral images of human brain

Fabelo, H., Halicek, M., Ortega, S., Shahedi, M., Szolna, A., Piñeiro, J. F., Sosa, C., O’Shanahan, A. J., Bisshopp, S., Espino, C., Márquez, M., Hernández, M., Carrera, D., Morera, J., Callico, G. M., Sarmiento, R. & Fei, B., Feb 2 2019, In : Sensors (Switzerland). 19, 4, 920.

Research output: Contribution to journalArticle

Open Access
13 Scopus citations

Deep learning-based three-dimensional segmentation of the prostate on computed tomography images

Shahedi, M., Halicek, M., Dormer, J. D., Schuster, D. M. & Fei, B., Apr 1 2019, In : Journal of Medical Imaging. 6, 2, 025003.

Research output: Contribution to journalArticle

Evaluating Multisite rCBV Consistency from DSC-MRI Imaging Protocols and Postprocessing Software Across the NCI Quantitative Imaging Network Sites Using a Digital Reference Object (DRO)

Bell, L. C., Semmineh, N., An, H., Eldeniz, C., Wahl, R., Schmainda, K. M., Prah, M. A., Erickson, B. J., Korfiatis, P., Wu, C., Sorace, A. G., Yankeelov, T. E., Rutledge, N., Chenevert, T. L., Malyarenko, D., Liu, Y., Brenner, A., Hu, L. S., Zhou, Y., Boxerman, J. L. & 8 others, Yen, Y. F., Kalpathy-Cramer, J., Beers, A. L., Muzi, M., Madhuranthakam, A. J., Pinho, M., Johnson, B. & Quarles, C. C., Mar 1 2019, In : Tomography (Ann Arbor, Mich.). 5, 1, p. 110-117 8 p.

Research output: Contribution to journalArticle

Open Access

Head and Neck Cancer Detection in Digitized Whole-Slide Histology Using Convolutional Neural Networks

Halicek, M., Shahedi, M., Little, J. V., Chen, A. Y., Myers, L. L., Sumer, B. D. & Fei, B., Dec 1 2019, In : Scientific reports. 9, 1, 14043.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Histopathology Feature Mining and Association with Hyperspectral Imaging for the Detection of Squamous Neoplasia

Lu, G., Wang, D., Qin, X., Muller, S., Little, J. V., Wang, X., Chen, A. Y., Chen, G. & Fei, B., Dec 1 2019, In : Scientific reports. 9, 1, 17863.

Research output: Contribution to journalArticle

Open Access

Hyperspectral imaging for head and neck cancer detection: Specular glare and variance of the tumor margin in surgical specimens

Halicek, M., Fabelo, H., Ortega, S., Little, J. V., Wang, X., Chen, A. Y., Callico, G. M., Myers, L., Sumer, B. D. & Fei, B., Jul 1 2019, In : Journal of Medical Imaging. 6, 3, 035004.

Research output: Contribution to journalArticle

3 Scopus citations

Hyperspectral imaging of head and neck squamous cell carcinoma for cancer margin detection in surgical specimens from 102 patients using deep learning

Halicek, M., Dormer, J. D., Little, J. V., Chen, A. Y., Myers, L., Sumer, B. D. & Fei, B., Sep 2019, In : Cancers. 11, 9, 1367.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations
2 Scopus citations

Optical biopsy of head and neck cancer using hyperspectral imaging and convolutional neural networks

Halicek, M., Little, J. V., Wang, X., Chen, A. Y. & Fei, B., Mar 1 2019, In : Journal of biomedical optics. 24, 3, 036007.

Research output: Contribution to journalArticle

Open Access
10 Scopus citations
Open Access
8 Scopus citations
2018

Bombesin functionalized 64Cu-copper sulfide nanoparticles for targeted imaging of orthotopic prostate cancer

Cai, H., Xie, F., Mulgaonkar, A., Chen, L., Sun, X., Hsieh, J. T., Peng, F., Tian, R., Li, L., Wu, C. & Ai, H., Jan 1 2018, In : Nanomedicine. 13, 14

Research output: Contribution to journalArticle

6 Scopus citations

PSNet: Prostate segmentation on MRI based on a convolutional neural network

Tian, Z., Liu, L., Zhang, Z. & Fei, B., Apr 1 2018, In : Journal of Medical Imaging. 5, 2, 021208.

Research output: Contribution to journalArticle

15 Scopus citations
2017

Addressing metabolic heterogeneity in clear cell renal cell carcinoma with quantitative Dixon MRI

Zhang, Y., Udayakumar, D., Cai, L., Hu, Z., Kapur, P., Kho, E. Y., Pavía-Jiménez, A., Fulkerson, M., de Leon, A. D., Yuan, Q., Dimitrov, I. E., Yokoo, T., Ye, J., Mitsche, M. A., Kim, H., McDonald, J. G., Xi, Y., Madhuranthakam, A. J., Dwivedi, D. K., Lenkinski, R. E. & 5 others, Cadeddu, J. A., Margulis, V., Brugarolas, J., DeBerardinis, R. J. & Pedrosa, I., Aug 3 2017, In : JCI Insight. 2, 15

Research output: Contribution to journalArticle

Open Access
16 Scopus citations

A supervoxel-based segmentation method for prostate MR images:

Tian, Z., Liu, L., Zhang, Z., Xue, J. & Fei, B., Feb 2017, In : Medical physics. 44, 2, p. 558-569 12 p.

Research output: Contribution to journalArticle

7 Scopus citations
2016

Superpixel-Based Segmentation for 3D Prostate MR Images

Tian, Z., Liu, L., Zhang, Z. & Fei, B., Mar 2016, In : IEEE Transactions on Medical Imaging. 35, 3, p. 791-801 11 p., 7312972.

Research output: Contribution to journalArticle

64 Scopus citations
2015

Simulating cardiac ultrasound image based on MR diffusion tensor imaging

Qin, X., Wang, S., Shen, M., Lu, G., Zhang, X., Wagner, M. B. & Fei, B., Sep 1 2015, In : Medical physics. 42, 9, p. 5144-5156 13 p.

Research output: Contribution to journalArticle

5 Scopus citations
2014

A robust and accurate center-frequency estimation (RACE) algorithm for improving motion estimation performance of SinMod on tagged cardiac MR images without known tagging parameters

Liu, H., Wang, J., Xu, X., Song, E., Wang, Q., Jin, R., Hung, C. C. & Fei, B., Nov 1 2014, In : Magnetic Resonance Imaging. 32, 9, p. 1139-1155 17 p.

Research output: Contribution to journalArticle

4 Scopus citations

Breast tomosynthesis with monochromatic beams: A feasibility study using Monte Carlo simulations

Malliori, A., Bliznakova, K., Sechopoulos, I., Kamarianakis, Z., Fei, B. & Pallikarakis, N., Aug 21 2014, In : Physics in medicine and biology. 59, 16, p. 4681-4696 16 p.

Research output: Contribution to journalArticle

4 Scopus citations

Measuring myofiber orientations from high-frequency ultrasound images using multiscale decompositions

Qin, X. & Fei, B., Jul 21 2014, In : Physics in medicine and biology. 59, 14, p. 3907-3924 18 p.

Research output: Contribution to journalArticle

13 Scopus citations

Medical hyperspectral imaging: A review

Lu, G. & Fei, B., Jan 2014, In : Journal of biomedical optics. 19, 1, 010901.

Research output: Contribution to journalArticle

Open Access
650 Scopus citations

Metformin beyond diabetes: Pleiotropic benefits of metformin in attenuation of atherosclerosis

Forouzandeh, F., Salazar, G., Patrushev, N., Xiong, S., Hilenski, L., Fei, B. & Wayne Alexander, R., Jan 1 2014, In : Journal of the American Heart Association. 3, 6, 001202.

Research output: Contribution to journalArticle

Open Access
59 Scopus citations

Spectral-spatial classification for noninvasive cancer detection using hyperspectral imaging

Lu, G., Halig, L., Wang, D., Qin, X., Chen, Z. G. & Fei, B., Oct 1 2014, In : Journal of biomedical optics. 19, 10, 106004.

Research output: Contribution to journalArticle

55 Scopus citations

Targeted iron-oxide nanoparticle for photodynamic therapy and imaging of head and neck cancer

Wang, D., Fei, B., Halig, L. V., Qin, X., Hu, Z., Xu, H., Wang, Y. A., Chen, Z., Kim, S., Shin, D. M. & Chen, Z., Jul 22 2014, In : ACS Nano. 8, 7, p. 6620-6632 13 p.

Research output: Contribution to journalArticle

Open Access
75 Scopus citations
2013

Automatic segmentation of right ventricular ultrasound images using sparse matrix transform and a level set

Qin, X., Cong, Z. & Fei, B., Nov 7 2013, In : Physics in medicine and biology. 58, 21, p. 7609-7624 16 p.

Research output: Contribution to journalArticle

26 Scopus citations

Ferritin nanocages to encapsulate and deliver photosensitizers for efficient photodynamic therapy against cancer

Zhen, Z., Tang, W., Guo, C., Chen, H., Lin, X., Liu, G., Fei, B., Chen, X., Xu, B. & Xie, J., Aug 27 2013, In : ACS Nano. 7, 8, p. 6988-6996 9 p.

Research output: Contribution to journalArticle

168 Scopus citations

Human organic cation transporters 1 (SLC22A1), 2 (SLC22A2), and 3 (SLC22A3) as disposition pathways for fluoroquinolone antimicrobials

Mulgaonkar, A., Venitz, J., Gründemann, D. & Sweet, D. H., Jun 1 2013, In : Antimicrobial agents and chemotherapy. 57, 6, p. 2705-2711 7 p.

Research output: Contribution to journalArticle

Open Access
24 Scopus citations
Open Access
16 Scopus citations

Nonrigid point registration for 2D curves and 3D surfaces and its various applications

Wang, H. & Fei, B., Jun 21 2013, In : Physics in medicine and biology. 58, 12, p. 4315-4330 16 p.

Research output: Contribution to journalArticle

13 Scopus citations

Power spectrum analysis of the x-ray scatter signal in mammography and breast tomosynthesis projections

Sechopoulos, I., Bliznakova, K. & Fei, B., Jan 1 2013, In : Medical physics. 40, 10, 101905.

Research output: Contribution to journalArticle

4 Scopus citations
2012

3D ultrasound image segmentation using wavelet support vector machines

Akbari, H. & Fei, B., Jun 2012, In : Medical physics. 39, 6, p. 2972-2984 13 p.

Research output: Contribution to journalArticle

32 Scopus citations

An MR image-guided, voxel-based partial volume correction method for PET images

Wang, H. & Fei, B., Jan 2012, In : Medical physics. 39, 1, p. 179-194 16 p.

Research output: Contribution to journalArticle

33 Scopus citations

Assessment of coronary artery calcium using dual-energy subtraction digital radiography

Mafi, J. N., Fei, B., Roble, S., Dota, A., Katrapati, P., Bezerra, H. G., Wang, H., Wang, W., Ciancibello, L., Costa, M., Simon, D. I., Orringer, C. E. & Gilkeson, R. C., Feb 2012, In : Journal of Digital Imaging. 25, 1, p. 129-136 8 p.

Research output: Contribution to journalArticle

10 Scopus citations

Characterization of the homogeneous tissue mixture approximation in breast imaging dosimetry

Sechopoulos, I., Bliznakova, K., Qin, X., Fei, B. & Feng, S. S. J., Aug 2012, In : Medical physics. 39, 8, p. 5050-5059 10 p.

Research output: Contribution to journalArticle

43 Scopus citations

Cupping artifact correction and automated classification for high-resolution dedicated breast CT images

Yang, X., Wu, S., Sechopoulos, I. & Fei, B., Oct 2012, In : Medical physics. 39, 10, p. 6397-6406 10 p.

Research output: Contribution to journalArticle

42 Scopus citations

Hyperspectral imaging and quantitative analysis for prostate cancer detection

Akbari, H., Halig, L. V., Schuster, D. M., Osunkoya, A., Master, V., Nieh, P. T., Chen, G. Z. & Fei, B., Jul 1 2012, In : Journal of biomedical optics. 17, 7, 076005.

Research output: Contribution to journalArticle

126 Scopus citations

MO‐F‐213CD‐08: Characterization of the Homogeneous Breast Tissue Mixture Approximation for Breast Image Dosimetry

Feng, S., Bliznakova, K., Qin, X., Fei, B. & Sechopoulos, I., Jun 2012, In : Medical physics. 39, 6, 1 p.

Research output: Contribution to journalArticle

1 Scopus citations

MRPET quantification tools: Registration, segmentation, classification, and MR-based attenuation correction

Fei, B., Yang, X., Nye, J. A., Aarsvold, J. N., Raghunath, N., Cervo, M., Stark, R., Meltzer, C. C. & Votaw, J. R., Oct 2012, In : Medical physics. 39, 10, p. 6443-6454 12 p.

Research output: Contribution to journalArticle

37 Scopus citations

TU‐A‐BRA‐02: Incorporating PET/CT Images into 3D Ultrasound‐Guided Biopsy of the Prostate

Fei, B., Schuster, D., Master, V. & Nieh, P., Jun 2012, In : Medical physics. 39, 6, 1 p.

Research output: Contribution to journalArticle

6 Scopus citations
2011

A multiscale and multiblock fuzzy C-means classification method for brain MR images

Yang, X. & Fei, B., Jun 2011, In : Medical physics. 38, 6, p. 2879-2891 13 p.

Research output: Contribution to journalArticle

45 Scopus citations

A wavelet multiscale denoising algorithm for magnetic resonance (MR) images

Yang, X. & Fei, B., Feb 2011, In : Measurement Science and Technology. 22, 2, 025803.

Research output: Contribution to journalArticle

44 Scopus citations
2010

Choline PET for monitoring early tumor response to photodynamic therapy

Fei, B., Wang, H., Wu, C. & Chiu, S. M., Jan 1 2010, In : Journal of Nuclear Medicine. 51, 1, p. 130-138 9 p.

Research output: Contribution to journalArticle

Open Access
26 Scopus citations

Diffusion-weighted MRI for monitoring tumor response to photodynamic therapy

Wang, H. & Fei, B., Aug 1 2010, In : Journal of Magnetic Resonance Imaging. 32, 2, p. 409-417 9 p.

Research output: Contribution to journalArticle

26 Scopus citations