• 590 Citations
  • 14 h-Index
20032019

Research output per year

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Research Output

  • 590 Citations
  • 14 h-Index
  • 26 Article
  • 5 Conference contribution
  • 1 Comment/debate
  • 1 Review article
2019

An image-based assay to quantify changes in proliferation and viability upon drug treatment in 3D microenvironments

Murali, V. S., Chang, B. J., Fiolka, R., Danuser, G., Cobanoglu, M. C. & Welf, E. S., May 28 2019, In : BMC Cancer. 19, 1, 502.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Enhanced Dendritic Actin Network Formation in Extended Lamellipodia Drives Proliferation in Growth-Challenged Rac1 P29S Melanoma Cells

Mohan, A. S., Dean, K. M., Isogai, T., Kasitinon, S. Y., Murali, V. S., Roudot, P., Groisman, A., Reed, D. K., Welf, E. S., Han, S. J., Noh, J. & Danuser, G., May 6 2019, In : Developmental cell. 49, 3, p. 444-460.e9

Research output: Contribution to journalArticle

2 Scopus citations

Nuclear positioning facilitates amoeboid migration along the path of least resistance

Renkawitz, J., Kopf, A., Stopp, J., de Vries, I., Driscoll, M. K., Merrin, J., Hauschild, R., Welf, E. S., Danuser, G., Fiolka, R. & Sixt, M., Apr 25 2019, In : Nature. 568, 7753, p. 546-550 5 p.

Research output: Contribution to journalArticle

19 Scopus citations

Robust and automated detection of subcellular morphological motifs in 3D microscopy images

Driscoll, M. K., Welf, E. S., Jamieson, A. R., Dean, K. M., Isogai, T., Fiolka, R. & Danuser, G., Oct 1 2019, In : Nature methods. 16, 10, p. 1037-1044 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Universal light-sheet generation with field synthesis

Chang, B. J., Kittisopikul, M., Dean, K. M., Roudot, P., Welf, E. S. & Fiolka, R., Mar 1 2019, In : Nature methods. 16, 3, p. 235-238 4 p.

Research output: Contribution to journalArticle

7 Scopus citations
2018

A sparse-to-dense method for 3D optical flow estimation in 3D light-microscopy image sequences

Manandhar, S., Bouthemy, P., Welf, E., Roudot, P. & Kervrann, C., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 952-956 5 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

Imaging subcellular dynamics with fast and lightefficient volumetrically parallelized microscopy

Dean, K. M., Roudot, P., Welf, E. S., Pohlkamp, T., Garrelts, G., Herz, J. & Fiolka, R., Feb 20 2017, In : Optica. 4, 2, p. 263-271 9 p.

Research output: Contribution to journalArticle

15 Scopus citations
2016

A bright cyan-excitable orange fluorescent protein facilitates dual-emission microscopy and enhances bioluminescence imaging in vivo

Chu, J., Oh, Y., Sens, A., Ataie, N., Dana, H., Macklin, J. J., Laviv, T., Welf, E. S., Dean, K. M., Zhang, F., Kim, B. B., Tang, C. T., Hu, M., Baird, M. A., Davidson, M. W., Kay, M. A., Fiolka, R., Yasuda, R., Kim, D. S., Ng, H. L. & 1 others, Lin, M. Z., Jul 1 2016, In : Nature biotechnology. 34, 7, p. 760-767 8 p.

Research output: Contribution to journalArticle

77 Scopus citations

Diagonally Scanned Light-Sheet Microscopy for Fast Volumetric Imaging of Adherent Cells

Dean, K. M., Roudot, P., Reis, C. R., Welf, E. S., Mettlen, M. & Fiolka, R., Mar 29 2016, In : Biophysical Journal. 110, 6, p. 1456-1465 10 p.

Research output: Contribution to journalArticle

18 Scopus citations

Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments

Welf, E. S., Driscoll, M. K., Dean, K. M., Schäfer, C., Chu, J., Davidson, M. W., Lin, M. Z., Danuser, G. & Fiolka, R., Feb 22 2016, In : Developmental Cell. 36, 4, p. 462-475 14 p.

Research output: Contribution to journalArticle

33 Scopus citations

SNX9 promotes metastasis by enhancing cancer cell invasion via differential regulation of RhoGTPases

Bendris, N., Williams, K. C., Reis, C. R., Welf, E. S., Chen, P. H., Lemmers, B., Hahne, M., Leong, H. S. & Schmid, S. L., May 1 2016, In : Molecular Biology of the Cell. 27, 9, p. 1409-1419 11 p.

Research output: Contribution to journalArticle

14 Scopus citations
2015

Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy

Dean, K. M., Roudot, P., Welf, E. S., Danuser, G. & Fiolka, R., Jun 18 2015, In : Biophysical Journal. 108, 12, p. 2807-2815 9 p.

Research output: Contribution to journalArticle

50 Scopus citations

Linking morphodynamics and directional persistence of T lymphocyte migration

Liu, X., Welf, E. S. & Haugh, J. M., May 6 2015, In : Journal of the Royal Society Interface. 12, 106, 20141412.

Research output: Contribution to journalArticle

10 Scopus citations

Seeds of Locally Aligned Motion and Stress Coordinate a Collective Cell Migration

Zaritsky, A., Welf, E. S., Tseng, Y. Y., Angeles Rabadán, M., Serra-Picamal, X., Trepat, X. & Danuser, G., Dec 15 2015, In : Biophysical Journal. 109, 12, p. 2492-2600 109 p.

Research output: Contribution to journalArticle

32 Scopus citations
2014

Using fluctuation analysis to establish causal relations between cellular events without experimental perturbation

Welf, E. S. & Danuser, G., Jul 8 2014, In : Biophysical journal. 107, 11, p. 2492-2498 7 p.

Research output: Contribution to journalReview article

8 Scopus citations
2013

Bidirectional coupling between integrin-mediated signaling and actomyosin mechanics explains matrix-dependent intermittency of leading-edge motility

Welf, E. S., Johnson, H. E. & Haugh, J. M., Dec 15 2013, In : Molecular biology of the cell. 24, 24, p. 3945-3955 11 p.

Research output: Contribution to journalArticle

14 Scopus citations
2012

A spatial model for integrin clustering as a result of feedback between integrin activation and integrin binding

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Sep 19 2012, In : Biophysical journal. 103, 6, p. 1379-1389 11 p.

Research output: Contribution to journalArticle

33 Scopus citations

Migrating fibroblasts reorient directionality: By a metastable, PI3K-dependent mechanism

Welf, E. S., Ahmed, S., Johnson, H. E., Melvin, A. T. & Haugh, J. M., Apr 2 2012, In : Journal of Cell Biology. 197, 1, p. 105-114 10 p.

Research output: Contribution to journalArticle

54 Scopus citations

Stochastic Models of Cell Protrusion Arising From Spatiotemporal Signaling and Adhesion Dynamics

Welf, E. S. & Haugh, J. M., Apr 9 2012, In : Methods in Cell Biology. 110, p. 223-241 19 p.

Research output: Contribution to journalArticle

4 Scopus citations
2011

In chemotaxing fibroblasts, both high-fidelity and weakly biased cell movements track the localization of PI3K signaling

Melvin, A. T., Welf, E. S., Wang, Y., Irvine, D. J. & Haugh, J. M., Apr 20 2011, In : Biophysical journal. 100, 8, p. 1893-1901 9 p.

Research output: Contribution to journalArticle

19 Scopus citations
9 Scopus citations

Signaling pathways that control cell migration: models and analysis

Welf, E. S. & Haugh, J. M., Mar 1 2011, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 3, 2, p. 231-240 10 p.

Research output: Contribution to journalArticle

50 Scopus citations
2010

Directional persistence of cell migration coincides with stability of asymmetric intracellular signaling

Weiger, M. C., Ahmed, S., Welf, E. S. & Haugh, J. M., Jan 6 2010, In : Biophysical Journal. 98, 1, p. 67-75 9 p.

Research output: Contribution to journalArticle

32 Scopus citations

Stochastic dynamics of membrane protrusion mediated by the DOCK180/Rac pathway in migrating cells

Welf, E. S. & Haugh, J. M., Mar 2010, In : Cellular and Molecular Bioengineering. 3, 1, p. 30-39 10 p.

Research output: Contribution to journalArticle

9 Scopus citations

Stochastic model of integrin-mediated signaling and adhesion dynamics at the leading edges of migrating cells

Cirit, M., Krajcovic, M., Choi, C. K., Welf, E. S., Horwitz, A. F. & Haugh, J. M., Feb 1 2010, In : PLoS Computational Biology. 6, 2, e1000688.

Research output: Contribution to journalArticle

39 Scopus citations
2009

Quantitative statistical description of integrin clusters in adherent cells

Welf, E. S., Ogunnaike, B. A. & Naik, U. P., Oct 2 2009, In : IET Systems Biology. 3, 5, p. 307-316 10 p.

Research output: Contribution to journalArticle

7 Scopus citations
2008

A control engineering model for hemostasis following blood vessel injury

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computational investigation of how integrin clustering affects cell adhesion and migration

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Experimental investigation of the relationship between integrin clustering and focal adhesion kinase phosphorylation

Welf, E. S., Ogunnaike, B. A. & Naik, U. P., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2005

A diffusion-reaction model for integrin clustering in response to cell adhesion

Welf, E. S., Naik, U. P. & Ogunnaike, B. A., Dec 1 2005, 05AIChE: 2005 AIChE Annual Meeting and Fall Showcase, Conference Proceedings. p. 8487-8494 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

31 Scopus citations
2003

Pulping Wax Containing Old Corrugated Containers with Hardwood Chips in a Kraft Pulping Operation

Welf, E. S., Venditti, R. A., Jameel, H. & Renard, J. J., Feb 1 2003, In : Progress in Paper Recycling. 12, 2, p. 13-18 6 p.

Research output: Contribution to journalArticle

1 Scopus citations