Find Research Outputs

2019

A bayesian mark interaction model for analysis of tumor pathology images

Li, B. Q., Wang, X., Liang, F. & Xiao, G., Sep 2019, In : Annals of Applied Statistics. 13, 3, p. 1708-1732 25 p.

Research output: Contribution to journalArticle

Open Access
Pathology
Tumors
Tumor
Spatial Correlation
Cancer

Abbreviated MRI Protocols for the Abdomen

Canellas, R., Rosenkrantz, A. B., Taouli, B., Sala, E., Saini, S., Pedrosa, I., Wang, Z. J. & Sahani, D. V., May 1 2019, In : Radiographics : a review publication of the Radiological Society of North America, Inc. 39, 3, p. 744-758 15 p.

Research output: Contribution to journalArticle

Abdomen
Costs and Cost Analysis
Ovarian Cysts
Workflow
Physiologic Monitoring
1 Citation (Scopus)

Abdominal Sacrocolpopexy for Repair of Pelvic Organ Prolapse after Radical Cystectomy

Zimmern, P. E. & Wang, C. N., May 1 2019, In : Female Pelvic Medicine and Reconstructive Surgery. 25, 3, p. 218-221 4 p.

Research output: Contribution to journalArticle

Pelvic Organ Prolapse
Cystectomy
Hernia
Prolapse
Recurrence

Aberrant expression of oxidative stress related proteins affects the pregnancy outcome of gestational diabetes mellitus patients

Zhang, C., Yang, Y., Chen, R., Wei, Y., Feng, Y., Zheng, W., Liao, H. & Zhang, Z., Jan 1 2019, In : American Journal of Translational Research. 11, 1, p. 269-279 11 p.

Research output: Contribution to journalArticle

Pregnancy Proteins
Oxidative stress
Gestational Diabetes
Pregnancy Outcome
Medical problems
3 Citations (Scopus)

Aberrant FGFR signaling mediates resistance to CDK4/6 inhibitors in ER+ breast cancer

Formisano, L., Lu, Y., Servetto, A., Hanker, A. B., Jansen, V. M., Bauer, J. A., Sudhan, D. R., Guerrero-Zotano, A. L., Croessmann, S., Guo, Y., Ericsson, P. G., Lee, K. M., Nixon, M. J., Schwarz, L. J., Sanders, M. E., Dugger, T. C., Cruz, M. R., Behdad, A., Cristofanilli, M., Bardia, A. & 11 others, O’Shaughnessy, J., Nagy, R. J., Lanman, R. B., Solovieff, N., He, W., Miller, M., Su, F., Shyr, Y., Mayer, I. A., Balko, J. M. & Arteaga, C. L., Dec 1 2019, In : Nature communications. 10, 1, 1373.

Research output: Contribution to journalArticle

Open Access
breast
inhibitors
cancer
Breast Neoplasms
Protein-Tyrosine Kinases
Barrett Esophagus
Meta-Analysis
Case-Control Studies
Cohort Studies
Biopsy

A bigenic mouse model of FSGS reveals perturbed pathways in podocytes, mesangial cells and endothelial cells

Potter, A. S., Drake, K. A., Brunskill, E. W. & Steven Potter, S., Jan 1 2019, In : PloS one. 14, 8, e0216261.

Research output: Contribution to journalArticle

Open Access
Podocytes
Mesangial Cells
Endothelial cells
endothelial cells
Endothelial Cells

A bioactive mammalian disaccharide associated with autoimmunity activates STING-TBK1-dependent immune response

Fermaintt, C. S., Sano, K., Liu, Z., Ishii, N., Seino, J., Dobbs, N., Suzuki, T., Fu, Y-X., Lehrman, M. A., Matsuo, I. & Yan, N., Dec 1 2019, In : Nature communications. 10, 1, 2377.

Research output: Contribution to journalArticle

Open Access
Disaccharides
activity (biology)
Autoimmunity
Autoimmune Diseases
Polysaccharides
1 Citation (Scopus)
R-SNARE Proteins
Vesicle-Associated Membrane Protein 2
Synaptic Transmission
Synapses
Neurotransmitter Agents
3 Citations (Scopus)

A blood-based signature of cerebrospinal fluid Aβ 1–42 status

Alzheimer’s Disease Metabolomics Consortium & Alzheimer’s Disease Neuroimaging Initiative, Dec 1 2019, In : Scientific Reports. 9, 1, 4163.

Research output: Contribution to journalArticle

Open Access
Cerebrospinal Fluid
Amyloid
Alzheimer Disease
Positron-Emission Tomography
Area Under Curve

Abnormalities of hippocampal shape and subfield volumes in medication-free patients with obsessive–compulsive disorder

Zhang, L., Hu, X., Lu, L., Li, B., Hu, X., Bu, X., Li, H., Tang, S., Yang, Y., Roberts, N., Sweeney, J. A., Gong, Q. & Huang, X., Jan 1 2019, In : Human Brain Mapping.

Research output: Contribution to journalArticle

Hippocampus
Obsessive Behavior
Parahippocampal Gyrus
Software
Magnetic Resonance Imaging

Abulcasis (936–1013): his work and contribution to orthopaedics

Markatos, K., Mavrogenis, A., Brilakis, E., Korres, D., Karamanou, M. & Chronopoulos, E., Jan 1 2019, In : International Orthopaedics.

Research output: Contribution to journalReview article

Arabic Medicine
Orthopedics
Pharmacology
Physicians
Surgical Instruments

A case-based illustration of a dual-operator, dual microcatheter technique for side branch wiring

Hall, A. B., Xenogiannis, I., Burke, M. N. & Brilakis, E. S., Jan 1 2019, (Accepted/In press) In : Cardiovascular Revascularization Medicine.

Research output: Contribution to journalArticle

Percutaneous Coronary Intervention
Arterial Pressure
Pressure

A case report of phenytoin-induced eosinophilic pneumonia

Annoh Gordon, R. & Silhan, L. L., Jan 1 2019, In : Respiratory Medicine Case Reports. 28, 100922.

Research output: Contribution to journalArticle

Open Access
Pulmonary Eosinophilia
Phenytoin
Polypharmacy
Drug-Related Side Effects and Adverse Reactions
Eosinophils

A catastrophic vulvar ulcer

Prasad, S. & Mauskar, M. M., Jan 1 2019, In : American journal of obstetrics and gynecology.

Research output: Contribution to journalArticle

Ulcer
1 Citation (Scopus)

Acceptability of the Woman's Condom in a phase III multicenter open-label study

Chen, B. A., Blithe, D. L., Muraguri, G. R., Lance, A. A., Carr, B. R., Jensen, J. T., Kimble, T. D., Murthy, A. S., Schreiber, C. A., Thomas, M. A., Walsh, T. L., Westhoff, C. & Burke, A. E., Jan 1 2019, In : Contraception.

Research output: Contribution to journalArticle

Condoms
Sexually Transmitted Diseases
Pregnancy
Contraceptive Agents
Female Condoms

Accepted but Unacceptable: Peripheral IV Catheter Failure

Helm, R. E., Klausner, J. D., Klemperer, J. D., Flint, L. M. & Huang, E., May 1 2019, In : Journal of Infusion Nursing. 42, 3, p. 151-164 14 p.

Research output: Contribution to journalReview article

Catheters
Caregivers
Hand
Delivery of Health Care
4 Citations (Scopus)

Accumulation of PNPLA3 on lipid droplets is the basis of associated hepatic steatosis

BasuRay, S., Wang, Y., Smagris, E., Cohen, J. C. & Hobbs, H. H., May 7 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 19, p. 9521-9526 6 p.

Research output: Contribution to journalArticle

Open Access
Phospholipases
Liver
Triglycerides
Fatty Liver
Liver Diseases

Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Haas, B. J., Dobin, A., Li, B., Stransky, N., Pochet, N. & Regev, A., Oct 21 2019, In : Genome Biology. 20, 1, 213.

Research output: Contribution to journalArticle

Open Access
accuracy assessment
cancer
Transcriptome
neoplasms
RNA
9 Citations (Scopus)

Accuracy of the Liver Imaging Reporting and Data System in Computed Tomography and Magnetic Resonance Image Analysis of Hepatocellular Carcinoma or Overall Malignancy—A Systematic Review

van der Pol, C. B., Lim, C. S., Sirlin, C. B., McGrath, T. A., Salameh, J. P., Bashir, M. R., Tang, A., Singal, A., Costa, A. F., Fowler, K. & McInnes, M. D. F., Mar 1 2019, In : Gastroenterology. 156, 4, p. 976-986 11 p.

Research output: Contribution to journalArticle

Information Systems
Hepatocellular Carcinoma
Magnetic Resonance Spectroscopy
Tomography
Liver
15 Citations (Scopus)

A CD4+ T cell population expanded in lupus blood provides B cell help through interleukin-10 and succinate

Caielli, S., Veiga, D. T., Balasubramanian, P., Athale, S., Domic, B., Murat, E., Banchereau, R., Xu, Z., Chandra, M., Chung, C. H., Walters, L., Baisch, J., Wright, T., Punaro, M., Nassi, L. A., Stewart, K., Fuller, J., Ucar, D., Ueno, H., Zhou, J. & 2 others, Banchereau, J. & Pascual, V., Jan 1 2019, In : Nature Medicine. 25, 1, p. 75-81 7 p.

Research output: Contribution to journalLetter

T-cells
Succinic Acid
Systemic Lupus Erythematosus
Interleukin-10
Blood
1 Citation (Scopus)

Acetaminophen is Undetectable in Plasma From More Than Half of Patients Believed to Have Acute Liver Failure Due to Overdose

Acute Liver Failure Study Group, Sep 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 10, p. 2110-2116 7 p.

Research output: Contribution to journalArticle

Acute Liver Failure
Acetaminophen
Liver
Wounds and Injuries
Acetylcysteine
1 Citation (Scopus)

A chaperone for the stator units of a bacterial flagellum

Ribardo, D. A., Kelley, B. R., Johnson, J. G. & Hendrixson, D. R., Jan 1 2019, In : mBio. 10, 4, e01732-19.

Research output: Contribution to journalArticle

Open Access
Campylobacter jejuni
Flagella
Torque
Bacteria
Electric Power Supplies

A Chest-Laminated Ultrathin and Stretchable E-Tattoo for the Measurement of Electrocardiogram, Seismocardiogram, and Cardiac Time Intervals

Ha, T., Tran, J., Liu, S., Jang, H., Jeong, H., Mitbander, R., Huh, H., Qiu, Y., Duong, J., Wang, R. L., Wang, P., Tandon, A., Sirohi, J. & Lu, N., Jan 1 2019, In : Advanced Science. 1900290.

Research output: Contribution to journalArticle

Open Access
seismocardiography
electrocardiography
chest
Blood pressure
Electrocardiography
County Hospitals
Microsurgery
Patient Safety
Education
Surgical Flaps

Achieving Speaker Gender Equity at the SIR Annual Scientific Meeting: The Effect of Female Session Coordinators

Ghatan, C. E., Altamirano, J., Fassiotto, M., Perez, M. G., Maldonado, Y., Josephs, S., Sze, D. Y. & Kothary, N., Nov 2019, In : Journal of Vascular and Interventional Radiology. 30, 11, p. 1870-1875 6 p.

Research output: Contribution to journalArticle

Interventional Radiology
Linear Models
2 Citations (Scopus)

Acidic Bile Salts Induce Epithelial to Mesenchymal Transition via VEGF Signaling in Non-Neoplastic Barrett's Cells

Zhang, Q. D., Agoston, A. T., Pham, T. H., Zhang, W., Zhang, X., Huo, X., Peng, S., Bajpai, M., Das, K., Odze, R. D., Spechler, S. J. & Souza, R. F., Jan 1 2019, In : Gastroenterology. 156, 1, p. 130-144.e10

Research output: Contribution to journalArticle

Epithelial-Mesenchymal Transition
Barrett Esophagus
Bile Acids and Salts
Vascular Endothelial Growth Factor A
Cadherins

A clinicopathologic and molecular analysis of fumarate hydratase-deficient renal cell carcinoma in 32 patients

Lau, H. D., Chan, E., Fan, A. C., Kunder, C. A., Williamson, S. R., Zhou, M., Idrees, M. T., Maclean, F. M., Gill, A. J. & Kao, C. S., Jan 1 2019, (Accepted/In press) In : American Journal of Surgical Pathology.

Research output: Contribution to journalArticle

Fumarate Hydratase
Renal Cell Carcinoma
Immunohistochemistry
Mutation
Leiomyomatosis
1 Citation (Scopus)

ACMT Position Statement: Buprenorphine Administration in the Emergency Department

Wax, P. M., Stolbach, A. I., Schwarz, E. S., Warrick, B. J., Wiegand, T. J. & Nelson, L. S., Jan 1 2019, In : Journal of Medical Toxicology.

Research output: Contribution to journalArticle

Open Access
Buprenorphine
Hospital Emergency Service

ACMT Position Statement: Remove the Waiver Requirement for Prescribing Buprenorphine for Opioid Use Disorder

Marino, R., Perrone, J., Nelson, L. S., Wiegand, T. J., Schwarz, E. S., Wax, P. M. & Stolbach, A. I., Jan 1 2019, (Accepted/In press) In : Journal of Medical Toxicology.

Research output: Contribution to journalComment/debate

Buprenorphine
Opioid Analgesics
6 Citations (Scopus)

A comparative study of rank aggregation methods for partial and top ranked lists in genomic applications

Li, X., Wang, X. & Xiao, G., Jan 18 2019, In : Briefings in Bioinformatics. 20, 1, p. 178-189 12 p.

Research output: Contribution to journalArticle

Agglomeration
Cells
Non-Small Cell Lung Carcinoma
Guidelines
Research
Patient Readmission
Diskectomy
Medicare
Inpatients
Outpatients

A comparison of cholecystitis grading scales

Madni, T. D., Nakonezny, P. A., Imran, J. B., Taveras, L., Cunningham, H. B., Vela, R., Clark, A. T., Minshall, C. T., Eastman, A., Luk, S. S., Phelan, H. & Cripps, M. W., Mar 1 2019, In : Journal of Trauma and Acute Care Surgery. 86, 3, p. 471-478 8 p.

Research output: Contribution to journalArticle

Cholecystitis
Laparoscopic Cholecystectomy
Wounds and Injuries
Area Under Curve
Gallbladder Diseases

A comparison of contracture severity at acute discharge in patients with and without heterotopic ossification: A burn model system national database study

Yelvington, M. L., Godleski, M., Lee, A. F., Goverman, J., Herndon, D. N., Suman, O. E., Kowalske, K. J., Holavanahalli, R., Gibran, N. S., Esselman, P. C., Simko, L. C., Ryan, C. M. & Schneider, J. C., Jan 1 2019, In : Journal of Burn Care and Research. 40, 3, p. 349-354 6 p.

Research output: Contribution to journalArticle

Open Access
Heterotopic Ossification
Patient Discharge
Contracture
Elbow
Articular Range of Motion

A Comparison of Pavlik Harness Treatment Regimens for Dislocated but Reducible (Ortolani+) Hips in Infantile Developmental Dysplasia of the Hip

Hines, A. C., Neal, D. C., Beckwith, T., Jo, C. H. & Kim, H. K. W., Nov 1 2019, In : Journal of Pediatric Orthopaedics. 39, 10, p. 505-509 5 p.

Research output: Contribution to journalArticle

Hip Dislocation
Hip
Ambulatory Care
Therapeutics

A Comparison of Self-Reported Unmet Healthcare Needs among Adaptive and Able-Bodied Athletes

Ramey, L. N., Hayano, T., Blatz, D., Gedman, M. & Blauwet, C., Jan 1 2019, (Accepted/In press) In : PM and R.

Research output: Contribution to journalArticle

Athletes
Sports
Hockey
Delivery of Health Care
Recreation
1 Citation (Scopus)

A composition-dependent molecular clutch between T cell signaling condensates and actin

Ditlev, J. A., Vega, A. R., Köster, D. V., Su, X., Tani, T., Lakoduk, A. M., Vale, R. D., Mayor, S., Jaqaman, K. & Rosen, M. K., Jul 3 2019, In : eLife. 8

Research output: Contribution to journalArticle

Open Access
Cell signaling
T-cells
Clutches
Actins
T-Lymphocytes
2 Citations (Scopus)

A comprehensive study of epigenetic alterations in hepatocellular carcinoma identifies potential therapeutic targets

Bayo, J., Fiore, E. J., Dominguez, L. M., Real, A., Malvicini, M., Rizzo, M., Atorrasagasti, C., García, M. G., Argemi, J., Martinez, E. D. & Mazzolini, G. D., Jan 1 2019, In : Journal of Hepatology.

Research output: Contribution to journalArticle

Epigenomics
Hepatocellular Carcinoma
Lysine
Therapeutics
Atlases

A Computationally Efficient Model for Predicting Successful Memory Encoding Using Machine-Learning-based EEG Channel Selection

Saboo, K. V., Varatharajah, Y., Berry, B. M., Sperling, M. R., Gorniak, R., Davis, K. A., Jobst, B. C., Gross, R. E., Lega, B. C., Sheth, S. A., Kahana, M. J., Kucewicz, M. T., Worrell, G. A. & Iyer, R. K., May 16 2019, 9th International IEEE EMBS Conference on Neural Engineering, NER 2019. IEEE Computer Society, p. 323-327 5 p. 8717057. (International IEEE/EMBS Conference on Neural Engineering, NER; vol. 2019-March).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Learning systems
Data storage equipment
Electrodes
Set theory

A computational study of depth of vibration into vocal fold tissues

Palaparthi, A., Smith, S., Mau, I-F. T. & Titze, I. R., Feb 1 2019, In : Journal of the Acoustical Society of America. 145, 2, p. 881-891 11 p.

Research output: Contribution to journalArticle

vibration
trajectories
larynx
Computational
Fold
2 Citations (Scopus)

A computerized decision support tool to implement asthma guidelines for children and adolescents

National Institute of Allergy and Infectious Diseases–sponsored Inner-City Asthma Consortium, Jan 1 2019, (Accepted/In press) In : Journal of Allergy and Clinical Immunology.

Research output: Contribution to journalArticle

Asthma
Guidelines
Program Evaluation
Randomized Controlled Trials
Random Allocation

Acquisition of Early Developmental Milestones and Need for Special Education Services in Pediatric Multiple Sclerosis

Aaen, G., Waltz, M., Vargas, W., Makhani, N., Ness, J., Harris, Y., Casper, T. C., Benson, L., Candee, M., Chitnis, T., Gorman, M., Graves, J., Greenberg, B., Lotze, T., Mar, S., Tillema, J. M., Rensel, M., Rodriguez, M., Rose, J., Rubin, J. & 6 others, Schreiner, T., Waldman, A., Weinstock-Guttman, B., Belman, A., Waubant, E. & Krupp, L., Mar 1 2019, In : Journal of child neurology. 34, 3, p. 148-152 5 p.

Research output: Contribution to journalArticle

Special Education
Multiple Sclerosis
Pediatrics
Walking
Motor Skills

AcrAB-TolC Inhibition by Peptide-Conjugated Phosphorodiamidate Morpholino Oligomers Restores Antibiotic Activity in Vitro and in Vivo

Sturge, C. R., Felder-Scott, C. F., Pifer, R., Pybus, C., Jain, R., Geller, B. L. & Greenberg, D. E., Jan 1 2019, In : ACS Infectious Diseases.

Research output: Contribution to journalArticle

Morpholinos
Anti-Bacterial Agents
Peptides
Azithromycin
Lactams

ACR Appropriateness Criteria ® Abdominal Aortic Aneurysm Follow-up (Without Repair)

Expert Panel on Vascular Imaging:, May 1 2019, In : Journal of the American College of Radiology. 16, 5, p. S2-S6

Research output: Contribution to journalArticle

Abdominal Aortic Aneurysm
Aneurysm
Rupture
Guidelines
Aortography

ACR Appropriateness Criteria® Clinically Suspected Vascular Malformation of the Extremities

Expert Panel on Vascular Imaging:, Nov 2019, In : Journal of the American College of Radiology. 16, 11, p. S340-S347

Research output: Contribution to journalArticle

Vascular Malformations
Extremities
Guidelines
Arteriovenous Malformations
Arteriovenous Fistula

ACR Appropriateness Criteria® Headache

Expert Panel on Neurologic Imaging, Nov 2019, In : Journal of the American College of Radiology. 16, 11, p. S364-S377

Research output: Contribution to journalArticle

Headache
Guidelines
Tension-Type Headache
Papilledema
Headache Disorders

ACR Appropriateness Criteria ® Neck Mass-Adenopathy

Expert Panel on Neurologic Imaging, May 1 2019, In : Journal of the American College of Radiology. 16, 5, p. S150-S160

Research output: Contribution to journalArticle

Neck
Guidelines
Neoplasms
Expert Testimony
Radiology

ACR Appropriateness Criteria ® Neuroendocrine Imaging

Expert Panel on Neurologic Imaging, May 1 2019, In : Journal of the American College of Radiology. 16, 5, p. S161-S173

Research output: Contribution to journalArticle

Guidelines
Sella Turcica
Expert Testimony
Pituitary Gland
Radiology