Find Research Outputs — University of Texas Southwestern Medical Center

the National Institute on Alcohol Abuse and Alcoholism Clinical Investigations Group (NCIG) Study Group, Jan 1 2019, In : Alcoholism: Clinical and Experimental Research. 43, 1, p. 158-169 12 p.

Research output: Contribution to journal › Article

Placebos

Alcohols

Safety

Drinking

Alcohol Drinking

Gastroenterology for the Internist

Dunbar, K. E., Jan 1 2019, In : Medical Clinics of North America. 103, 1, p. xvii-xviii

Research output: Contribution to journal › Editorial

Gastroenterology

Gastroesophageal reflux disease and eosinophilic esophagitis

Spechler, S. J., Feb 1 2019, In : Gastroenterology and Hepatology. 15, 2, p. 111-113 3 p.

Research output: Contribution to journal › Comment/debate

Eosinophilic Esophagitis

Peptic Esophagitis

Gastroesophageal Reflux

Gboxin is an oxidative phosphorylation inhibitor that targets glioblastoma

Shi, Y., Lim, S. K., Liang, Q., Iyer, S. V., Wang, H. Y., Wang, Z., Xie, X., Sun, D., Chen, Y. J., Tabar, V., Gutin, P., Williams, N. S., De Brabander, J. K. & Parada, L. F., Mar 21 2019, In : Nature. 567, 7748, p. 341-346 6 p.

Research output: Contribution to journal › Article

Oxidative Phosphorylation

Glioblastoma

Neoplasms

Proton-Translocating ATPases

Mitochondrial Membranes

GeNeCK: A web server for gene network construction and visualization

Zhang, M., Li, Q., Yu, D., Yao, B., Guo, W., Xie, Y. & Xiao, G., Jan 7 2019, In : BMC Bioinformatics. 20, 1, 12.

Research output: Contribution to journal › Article

Gene Networks

Gene Regulatory Networks

Web Server

Servers

Visualization

Genetic Variants Associated With Vincristine-Induced Peripheral Neuropathy in Two Populations of Children With Acute Lymphoblastic Leukemia

Li, L., Sajdyk, T., Smith, E. M. L., Chang, C. W., Li, C., Ho, R. H., Hutchinson, R., Wells, E., Skiles, J. L., Winick, N. J., Martin, P. L. & Renbarger, J. L., Jan 1 2019, (Accepted/In press) In : Clinical Pharmacology and Therapeutics.

Research output: Contribution to journal › Article

Vincristine

Peripheral Nervous System Diseases

Precursor Cell Lymphoblastic Leukemia-Lymphoma

Population

Single Nucleotide Polymorphism

Genomic analysis demonstrates that histologically-defined astroblastomas are molecularly heterogeneous and that tumors with MN1 rearrangement exhibit the most favorable prognosis

Lehman, N. L., Usubalieva, A., Lin, T., Allen, S. J., Tran, Q. T., Mobley, B. C., McLendon, R. E., Schniederjan, M. J., Georgescu, M. M., Couce, M., Dulai, M. S., Raisanen, J. M., Al Abbadi, M., Palmer, C. A., Hattab, E. M. & Orr, B. A., Mar 15 2019, In : Acta neuropathologica communications. 7, 1, 1 p.

Research output: Contribution to journal › Article

Open Access

Neuroepithelial Neoplasms

Neoplasms

DNA Methylation

Ependymoma

DNA Fingerprinting

Giant congenital melanocytic nevus treated with trametinib

Mir, A., Agim, N. G., Kane, A. A., Josephs, S. C., Park, J. Y. & Ludwig, K., Mar 1 2019, In : Pediatrics. 143, 3, e20182469.

Research output: Contribution to journal › Article

Pigmented Nevus

Pruritus

Intractable Pain

Nevus

Melanoma

Glial cells maintain synapses by inhibiting an activity-dependent retrograde protease signal

Gould, T. W., Dominguez, B., de Winter, F., Yeo, G. W., Liu, P., Sundararaman, B., Stark, T., Vu, A., Degen, J. L., Lin, W. & Lee, K. F., Mar 1 2019, In : PLoS genetics. 15, 3, p. e1007948

Research output: Contribution to journal › Article

Open Access

neuroglia

synapse

Schwann cells

Neuroglia

Synapses

GRP78 (Glucose-Regulated Protein of 78 kDa) Promotes Cardiomyocyte Growth Through Activation of GATA4 (GATA-Binding Protein 4)

Zhang, G., Wang, X., Bi, X., Li, C., Deng, Y., Al-Hashimi, A. A., Luo, X., Gillette, T. G., Austin, R. C., Wang, Y. & Wang, Z., Feb 1 2019, In : Hypertension (Dallas, Tex. : 1979). 73, 2, p. 390-398 9 p.

Research output: Contribution to journal › Article

Cardiac Myocytes

Carrier Proteins

Growth

Unfolded Protein Response

Protein Folding

Gulf War illness associated with abnormal auditory P1 event-related potential: Evidence of impaired cholinergic processing replicated in a national sample

Tillman, G. D., Spence, J. S., Briggs, R. W., Haley, R. W., Hart, J. & Kraut, M. A., Jan 30 2019, In : Psychiatry Research - Neuroimaging. 283, p. 7-15 9 p.

Research output: Contribution to journal › Article

Gulf War

Veterans

Evoked Potentials

Cholinergic Agents

Persian Gulf Syndrome

Gypsy moth genome provides insights into flight capability and virus–host interactions

Zhang, J., Cong, Q., Rex, E. A., Hallwachs, W., Janzen, D. H., Grishin, N. V. & Gammon, D. B., Jan 29 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 5, p. 1669-1678 10 p.

Research output: Contribution to journal › Article

Moths

Genome

Gene Ontology

Population

Virus Diseases

H3 K27M Mutations in Thalamic Pilocytic Astrocytomas with Anaplasia

El Ahmadieh, T. Y., Plitt, A., Kafka, B., Aoun, S. G., Raisanen, J. M., Orr, B., Pan, E., Wardak, Z., Nedzi, L. A. & Patel, T. R., Apr 1 2019, In : World Neurosurgery. 124, p. 87-92 6 p.

Research output: Contribution to journal › Article

Anaplasia

Astrocytoma

Mutation

Neoplasms

Central Nervous System Neoplasms

Hallux valgus assessment on X-ray and Magnetic resonance Imaging (MRI): Correlation with qualitative soft tissue and internal derangement findings on MRI

Hummel, J., Skweres, J., Heineman, N., Dessouky, R., Xi, Y., Zhang, L., Wukich, D. K. & Chhabra, A., Apr 1 2019, In : European Journal of Radiology. 113, p. 24-31 8 p.

Research output: Contribution to journal › Article

Hallux Valgus

Magnetic Resonance Imaging

X-Rays

Joints

Hallux

HDAC inhibition as a therapeutic strategy in myocardial ischemia/reperfusion injury

Xie, M., Tang, Y. & Hill, J. A., Apr 1 2019, In : Journal of Molecular and Cellular Cardiology. 129, p. 188-192 5 p.

Research output: Contribution to journal › Review article

Myocardial Reperfusion Injury

Histone Deacetylases

Reperfusion Injury

Myocardial Ischemia

Myocardial Reperfusion

Headaches in Idiopathic Intracranial Hypertension

Friedman, D. I., Mar 1 2019, In : Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society. 39, 1, p. 82-93 12 p.

Research output: Contribution to journal › Article

Pseudotumor Cerebri

Headache

Primary Headache Disorders

Migraine Disorders

Guidelines

Head and neck burns are associated with long-term patient-reported dissatisfaction with appearance: A Burn Model System National Database study

Sinha, I., Nabi, M., Simko, L. C., Wolfe, A. W., Wiechman, S., Giatsidis, G., Bharadia, D., McMullen, K., Gibran, N. S., Kowalske, K. J., Meyer, W. J., Kazis, L. E., Ryan, C. M. & Schneider, J. C., Jan 1 2019, In : Burns.

Research output: Contribution to journal › Article

Burns

Neck

Head

Databases

Community Integration

Hearing Preservation in Stereotactic Radiosurgery for Vestibular Schwannoma

Tolisano, A. M. & Hunter, J. B., Jan 1 2019, In : Journal of Neurological Surgery, Part B: Skull Base. 80, 2, p. 156-164 9 p.

Research output: Contribution to journal › Review article

Acoustic Neuroma

Radiosurgery

Hearing

Radiation

Counseling

Hemostatic responses to exercise, dehydration, and simulated bleeding in heat-stressed humans

Borgman, M. A., Zaar, M., Aden, J. K., Schlader, Z. J., Gagnon, D., Rivas, E., Kern, J., Koons, N. J., Convertino, V. A., Cap, A. P. & Crandall, C. G., Feb 1 2019, In : American journal of physiology. Regulatory, integrative and comparative physiology. 316, 2, p. R145-R156

Research output: Contribution to journal › Article

Lower Body Negative Pressure

Hemostatics

Dehydration

Hot Temperature

Hemorrhage

Hepatic and cardiac and iron overload detected by T2* magnetic resonance (MRI) in patients with myelodisplastic syndrome: A cross-sectional study

Mantovani, L. F., Santos, F. P. S., Perini, G. F., Nascimento, C. M. B., Silva, L. P., Wroclawski, C. K., Esposito, B. P., Ribeiro, M. S. S., Velloso, E. D. R. P., Nomura, C. H., Kay, F. U., Baroni, R. H., Hamerschlak, N. & Schuster, S., Jan 1 2019, In : Leukemia Research. 76, p. 53-57 5 p.

Research output: Contribution to journal › Article

Iron Overload

Magnetic Resonance Spectroscopy

Cross-Sectional Studies

Magnetic Resonance Imaging

Liver

Hepatocellular Carcinoma Screening Is Associated With Increased Survival of Patients With Cirrhosis

Choi, D. T., Kum, H. C., Park, S., Ohsfeldt, R. L., Shen, Y., Parikh, N. D. & Singal, A., Apr 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 5, p. 976-987.e4

Research output: Contribution to journal › Article

Hepatocellular Carcinoma

Fibrosis

Survival

Neoplasms

Epidemiology

Hepatocellular Carcinoma Surveillance: An Effective But Complex Process

Singal, A. & Murphy, C. C., Mar 1 2019, In : Gastroenterology. 156, 4, 1 p.

Research output: Contribution to journal › Letter

Hepatocellular Carcinoma

Herpes Simplex Virus–Associated Acute Liver Failure Often Goes Unrecognized

the Acute Liver Failure Study Group, Jan 1 2019, (Accepted/In press) In : Hepatology.

Research output: Contribution to journal › Article

Acute Liver Failure

Simplexvirus

Heterogeneity and Variability in Pressure Autoregulation of Organ Blood Flow: Lessons Learned Over 100+ Years

Meng, L., Wang, Y., Zhang, L. & McDonagh, D. L., Mar 1 2019, In : Critical care medicine. 47, 3, p. 436-448 13 p.

Research output: Contribution to journal › Article

Homeostasis

Pressure

Perfusion

Blood Pressure

Viscera

High-flow versus standard nasal cannula in morbidly obese patients during colonoscopy: A prospective, randomized clinical trial

Riccio, C. A., Sarmiento, S., Minhajuddin, A. T. M., Nasir, D. & Fox, A. A., May 1 2019, In : Journal of Clinical Anesthesia. 54, p. 19-24 6 p.

Research output: Contribution to journal › Article

Colonoscopy

Randomized Controlled Trials

Propofol

Clinical Trials Data Monitoring Committees

Deep Sedation

High-Phosphate Diet Induces Exercise Intolerance and Impairs Fatty Acid Metabolism in Mice

Peri-Okonny, P., Baskin, K. K., Iwamoto, G. A., Mitchell, J. H., Smith, S. A., Kim, H. K., Szweda, L. I., Bassel-Duby, R. S., Fujikawa, T., Castorena, C. M., Richardson, J. A., Shelton, J. M., Ayers, C., Berry, J. D., Malladi, V. S., Hu, M. C., Moe, O. W., Scherer, P. E. & Vongpatanasin, W., Mar 12 2019, In : Circulation. 139, 11, p. 1422-1434 13 p.

Research output: Contribution to journal › Article

Fatty Acids

Phosphates

Diet

Skeletal Muscle Fibers

Serum

High-sensitivity troponin T, NT-proBNP and glomerular filtration rate: A multimarker strategy for risk stratification in chronic heart failure

Aimo, A., Januzzi, J. L., Vergaro, G., Ripoli, A., Latini, R., Masson, S., Magnoli, M., Anand, I. S., Cohn, J. N., Tavazzi, L., Tognoni, G., Gravning, J., Ueland, T., Nymo, S. H., Rocca, H. P. B. L., Bayes-Genis, A., Lupón, J., de Boer, R. A., Yoshihisa, A., Takeishi, Y. & 10 othersEgstrup, M., Gustafsson, I., Gaggin, H. K., Eggers, K. M., Huber, K., Tentzeris, I., Wilson Tang, W. H., Grodin, J. L., Passino, C. & Emdin, M., Feb 15 2019, In : International Journal of Cardiology. 277, p. 166-172 7 p.

Research output: Contribution to journal › Article

Troponin T

Brain Natriuretic Peptide

Glomerular Filtration Rate

Heart Failure

C-Reactive Protein

Histoplasmosis Infection of Aortobifemoral Graft Treated with a Neoaortoiliac System

Bennett, L. F., Klein, A. & Kirkwood, M. L., Jan 1 2019, In : Annals of Vascular Surgery.

Research output: Contribution to journal › Article

Histoplasmosis

Transplants

Infection

Histoplasma

Surgical Pathology

Homozygous rare Parn missense mutation in familial pulmonary fibrosis

Zhang, D., Zhou, Z., Abu-Hijleh, M. A., Batra, K., Xing, C. & Garcia, C. K., Mar 15 2019, In : American Journal of Respiratory and Critical Care Medicine. 199, 6, p. 797-799 3 p.

Research output: Contribution to journal › Letter

Pulmonary Fibrosis

Missense Mutation

Hormone Therapy in Children and Adolescents

Abramowitz, J. D., Jan 1 2019, In : Endocrinology and Metabolism Clinics of North America.

Research output: Contribution to journal › Review article

Puberty

Hormones

Gonadotropin-Releasing Hormone

Cosmetics

Therapeutics

Host-derived metabolites modulate transcription of salmonella genes involved in L-Lactate utilization during gut colonization

Gillis, C. C., Winter, M. G., Chanin, R. B., Zhu, W., Spiga, L. & Winter, S. E., Apr 1 2019, In : Infection and immunity. 87, 4, e00773.

Research output: Contribution to journal › Article

Salmonella

Lactic Acid

Genes

Oxygen

Electrons

Host Genetic Variant in CXCL16 May Be Associated With Hepatitis B Virus–Related Acute Liver Failure

Ajmera, V., Huang, H., Dao, D., Feld, J. J., Lau, D. T., Patel, K., Rule, J. A., Daly, M., Lee, W. M. & Chung, R. T., Jan 1 2019, (Accepted/In press) In : CMGH.

Research output: Contribution to journal › Article

Open Access

Acute Liver Failure

Hepatitis B virus

How Smooth Is the Road for Women in Medicine? A Pregnant Question

Jain, S., Jan 1 2019, In : Journal of General Internal Medicine.

Research output: Contribution to journal › Article

Medicine

Human Verbal Memory Encoding Is Hierarchically Distributed in a Continuous Processing Stream

Kucewicz, M. T., Saboo, K., Berry, B. M., Kremen, V., Miller, L. R., Khadjevand, F., Inman, C. S., Wanda, P., Sperling, M. R., Gorniak, R., Davis, K. A., Jobst, B. C., Lega, B. C., Sheth, S. A., Rizzuto, D. S., Iyer, R. K., Kahana, M. J. & Worrell, G. A., Jan 1 2019, In : eNeuro. 6, 1

Research output: Contribution to journal › Article

Open Access

Brain

Occipital Lobe

Temporal Lobe

Prefrontal Cortex

Epilepsy

Hyaluronan biology: A complex balancing act of structure, function, location and context

Garantziotis, S. & Savani, R. C., Jan 1 2019, In : Matrix Biology.

Research output: Contribution to journal › Review article

Hyaluronic Acid

CD44 Antigens

Biological Factors

Pathologic Processes

Cell Communication

Hybrid 2.0: Subintimal plaque modification for facilitation of future success in chronic total occlusion percutaneous coronary intervention

Hall, A. B. & Brilakis, E. S., Feb 1 2019, In : Catheterization and Cardiovascular Interventions. 93, 2, p. 199-201 3 p.

Research output: Contribution to journal › Editorial

Percutaneous Coronary Intervention

Stents

Dissection

Angiography

Radiation

2 Citations (Scopus)

Hyperpolarized ¹³C MRI: Path to Clinical Translation in Oncology

Kurhanewicz, J., Vigneron, D. B., Ardenkjaer-Larsen, J. H., Bankson, J. A., Brindle, K., Cunningham, C. H., Gallagher, F. A., Keshari, K. R., Kjaer, A., Laustsen, C., Mankoff, D. A., Merritt, M. E., Nelson, S. J., Pauly, J. M., Lee, P., Ronen, S., Tyler, D. J., Rajan, S. S., Spielman, D. M., Wald, L. & 3 othersZhang, X., Malloy, C. R. & Rizi, R., Jan 1 2019, In : Neoplasia (United States). 21, 1, p. 1-16 16 p.

Research output: Contribution to journal › Review article

Critical Pathways

Magnetic Resonance Imaging

Technology

Pyruvic Acid

Prostatic Neoplasms

Identification and characterization of an alternative cancer-derived PD-L1 splice variant

Hassounah, N. B., Malladi, V. S., Huang, Y., Freeman, S. S., Beauchamp, E. M., Koyama, S., Souders, N., Martin, S., Dranoff, G., Wong, K. K., Pedamallu, C. S., Hammerman, P. S. & Akbay, E., Mar 13 2019, In : Cancer Immunology, Immunotherapy. 68, 3, p. 407-420 14 p.

Research output: Contribution to journal › Article

Neoplasms

Exons

T-Lymphocytes

Cell Line

Immune Evasion

Identification and characterization of a poliovirus capsid mutant with enhanced thermal stability

Nguyen, Y., Jesudhasan, P. R., Aguilera, E. R. & Pfeiffer, J. K., Mar 1 2019, In : Journal of Virology. 93, 6, e01510-18.

Research output: Contribution to journal › Article

Enterovirus C

capsid

Poliovirus

Capsid

thermal stability

Identification of Calpain-Activated Protein Functions

Del Carmen Lafita-Navarro, M. & Conacci-Sorrell, M., Jan 1 2019, In : Methods in molecular biology (Clifton, N.J.). 1915, p. 149-160 12 p.

Research output: Contribution to journal › Article

Calpain

Proteins

Proteolysis

Workflow

Proteasome Endopeptidase Complex

Identification of NFAT5 as a transcriptional regulator of the EDN1 gene in collecting duct

Lakshmipathi, J., Wheatley, W., Kumar, A., Mercenne, G., Rodan, A. R. & Kohan, D. E., Mar 1 2019, In : American journal of physiology. Renal physiology. 316, 3, p. F481-F487

Research output: Contribution to journal › Article

Endothelin-1

Regulator Genes

Clustered Regularly Interspaced Short Palindromic Repeats

Chromatin Immunoprecipitation

Consensus Sequence

Identification of Protein Homologs and Domain Boundaries by Iterative Sequence Alignment

Schaeffer, D. & Grishin, N. V., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 277-286 10 p. (Methods in Molecular Biology; vol. 1851).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Sequence Alignment

Information Storage and Retrieval

Libraries

Software

Databases

Identifying genes with tri-modal association with survival and tumor grade in cancer patients

Zhang, M., Wang, T., Sirianni, R., Shaul, P. W. & Xie, Y., Jan 8 2019, In : BMC Bioinformatics. 20, 1, 13.

Research output: Contribution to journal › Article

Tumors

Tumor

Cancer

Genes

Gene

IFNG-induced IFIT5 promotes epithelial-to-mesenchymal transition in prostate cancer via miRNA processing

Lo, U. G., Pong, R. C., Yang, D., Gandee, L., Hernandez, E., Dang, A., Lin, C. J., Santoyo, J., Ma, S., Sonavane, R., Huang, J., Tseng, S. F., Moro, L., Arbini, A. A., Kapur, P., Raj, G., He, D., Lai, C. H., Lin, H. & Hsieh, J-T., Jan 1 2019, In : Cancer Research. 79, 6, p. 1098-1112 15 p.

Research output: Contribution to journal › Article

Epithelial-Mesenchymal Transition

MicroRNAs

Prostatic Neoplasms

Immunity

Transcription Factors

Image-guided cranial irradiation-induced ablation of dentate gyrus neurogenesis impairs extinction of recent morphine reward memories

Rivera, P. D., Simmons, S. J., Reynolds, R. P., Just, A. L., Birnbaum, S. G. & Eisch, A. J., Jan 1 2019, In : Hippocampus.

Research output: Contribution to journal › Article

Cranial Irradiation

Neurogenesis

Dentate Gyrus

Reward

Morphine

Imaging of acquired transdiaphragmatic fistulae and communications

Chaturvedi, A., Rajiah, P. & Chaturvedi, A., Jan 1 2019, In : Clinical Imaging. 53, p. 78-88 11 p.

Research output: Contribution to journal › Review article

Fistula

Communication

Abdomen

Blood Vessels

Thorax

Imaging Of Occupational Lung Diseases

Batra, K., Aziz, M. U., Adams, T. N. & Godwin, J. D., Jan 1 2019, (Accepted/In press) In : Seminars in Roentgenology.

Research output: Contribution to journal › Article

Occupational Diseases

Lung Diseases