Find Research Outputs

2019

2019 Update of the American College of Rheumatology Recommended Rheumatoid Arthritis Disease Activity Measures

England, B. R., Tiong, B. K., Bergman, M. J., Curtis, J. R., Kazi, S., Mikuls, T. R., O'Dell, J. R., Ranganath, V. K., Limanni, A., Suter, L. G. & Michaud, K., Jan 1 2019, (Accepted/In press) In : Arthritis Care and Research.

Research output: Contribution to journalArticle

Open Access
Rheumatoid Arthritis
Process Assessment (Health Care)
Rheumatology
Blood Sedimentation
C-Reactive Protein

2020 Herbert Tabor Early Career Investigator Awards: Call for nominations

Gierasch, L. M. & DeMartino, G. N., Jan 1 2019, In : Journal of Biological Chemistry. 294, 36, 1 p.

Research output: Contribution to journalEditorial

Open Access
Research Personnel

24-hour and 30-day perioperative mortality in pediatric surgery

Bonasso, P. C., Dassinger, M. S., Ryan, M. L., Gowen, M. S., Burford, J. M. & Smith, S. D., Apr 2019, In : Journal of Pediatric Surgery. 54, 4, p. 628-630 3 p.

Research output: Contribution to journalArticle

Pediatrics
Necrotizing Enterocolitis
Mortality
Information Storage and Retrieval
Blood Transfusion

2-Amino-2,3-dihydro-1 H-indene-5-carboxamide-Based Discoidin Domain Receptor 1 (DDR1) Inhibitors: Design, Synthesis, and in Vivo Antipancreatic Cancer Efficacy

Zhu, D., Huang, H., Pinkas, D. M., Luo, J., Ganguly, D., Fox, A. E., Arner, E., Xiang, Q., Tu, Z. C., Bullock, A. N., Brekken, R. A., Ding, K. & Lu, X., Jan 1 2019, (Accepted/In press) In : Journal of Medicinal Chemistry.

Research output: Contribution to journalArticle

Pancreatic Neoplasms
Neoplasms
Epithelial-Mesenchymal Transition
Inhibitory Concentration 50
Phosphotransferases

2D gel electrophoresis reveals dynamics of t-loop formation during the cell cycle and t-loop in maintenance regulated by heterochromatin state

Zhang, Z., Zhang, T., Ge, Y., Tang, M., Ma, W., Zhang, Q., Gong, S., Wright, W. E., Shay, J. W., Liu, H. & Zhao, Y., Jan 1 2019, In : Journal of Biological Chemistry. 294, 16, p. 6645-6656 12 p.

Research output: Contribution to journalArticle

Heterochromatin
Telomere
Electrophoresis, Gel, Two-Dimensional
Electrophoresis
Cell Cycle

2-Pyrrolidinone and succinimide as clinical screening biomarkers for gaba-transaminase deficiency: Anti-seizure medications impact accurate diagnosis

Kennedy, A. D., Pappan, K. L., Donti, T., Delgado, M. R., Shinawi, M., Pearson, T. S., Lalani, S. R., Craigen, W. E., Sutton, V. R., Evans, A. M., Sun, Q., Emrick, L. T. & Elsea, S. H., Jan 1 2019, In : Frontiers in Neuroscience. 13, MAY, 394.

Research output: Contribution to journalArticle

Open Access
Post-Traumatic Epilepsy
Metabolomics
Biomarkers
Cerebrospinal Fluid
gamma-Aminobutyric Acid
3 Citations (Scopus)

3-dimensional visualization of implant-tissue interface with the polyethylene glycol associated solvent system tissue clearing method

Yi, Y., Men, Y., Jing, D., Luo, W., Zhang, S., Feng, J. Q., Liu, J., Ge, W., Wang, J. & Zhao, H., May 1 2019, In : Cell Proliferation. 52, 3, e12578.

Research output: Contribution to journalArticle

Open Access
Stainless Steel
Titanium
Osseointegration
Osteogenesis
Histological Techniques

3D printing for bio-synthetic biliary stents

Boyer, C. J., Boktor, M., Samant, H., White, L. A., Wang, Y., Ballard, D. H., Huebert, R. C., Woerner, J. E., Ghali, G. E. & Alexander, J. S., Jan 2019, In : Bioengineering. 6, 1, 16.

Research output: Contribution to journalArticle

Open Access
Stents
Stem cells
Tissue engineering
Printing
Collagen
4 Citations (Scopus)
Organs at Risk
Head and Neck Neoplasms
Radiotherapy
Learning
Prescriptions

50 Adjunctive Buprenorphine/Samidorphan Combination in Patients with Major Depressive Disorder: Phase 3 Long-term Extension Study Results

Thase, M., Stanford, A. D., Memisoglu, A., Martin, W., Claxton, A., Bodnik, J. A., Trivedi, M. H., Fava, M. & Pathak, S., Feb 1 2019, In : CNS spectrums. 24, 1, p. 203-204 2 p.

Research output: Contribution to journalArticle

Open Access
Buprenorphine
Major Depressive Disorder
Antidepressive Agents
Depression
Therapeutics

A 20 years conundrum of neonatal encephalopathy and hypoxic ischemic encephalopathy: are we closer to a consensus guideline?

Chalak, L. F., Ferriero, D. M., Gressens, P., Molloy, E. & Bearer, C., Jan 1 2019, (Accepted/In press) In : Pediatric Research.

Research output: Contribution to journalEditorial

Open Access
Brain Hypoxia-Ischemia
Brain Diseases
Guidelines

A 2-Year Cost Analysis of Maximum Nonoperative Treatments in Patients With Symptomatic Lumbar Stenosis or Spondylolisthesis That Ultimately Required Surgery

Adogwa, O., Davison, M. A., Lilly, D. T., Vuong, V. D., Desai, S. A., Moreno, J., Cheng, J. & Bagley, C. A., Jun 1 2019, In : Global Spine Journal. 9, 4, p. 424-433 10 p.

Research output: Contribution to journalArticle

Open Access
Spondylolisthesis
Pathologic Constriction
Costs and Cost Analysis
Opioid Analgesics
Epidural Injections

A Bacterial Effector Mimics a Host HSP90 Client to Undermine Immunity

Lopez, V. A., Park, B. C., Nowak, D., Sreelatha, A., Zembek, P., Fernandez, J., Servage, K. A., Gradowski, M., Hennig, J., Tomchick, D. R., Pawłowski, K., Krzymowska, M. & Tagliabracci, V. S., Sep 19 2019, In : Cell. 179, 1, p. 205-218.e21

Research output: Contribution to journalArticle

Protein Kinases
Immunity
Phosphorylation
Pathogens
Plant Immunity

A Bayesian hidden Potts mixture model for analyzing lung cancer pathology images

Li, Q., Wang, X., Liang, F., Yi, F., Xie, Y., Gazdar, A. & Xiao, G., Oct 1 2019, In : Biostatistics (Oxford, England). 20, 4, p. 565-581 17 p.

Research output: Contribution to journalArticle

Lung Cancer
Potts Model
Mixture Model
Cell
Tumor

A bayesian mark interaction model for analysis of tumor pathology images

Li, B. Q., Wang, X., Liang, F. & Xiao, G., Sep 2019, In : Annals of Applied Statistics. 13, 3, p. 1708-1732 25 p.

Research output: Contribution to journalArticle

Open Access
Pathology
Tumors
Tumor
Spatial Correlation
Cancer

Abbreviated MRI Protocols for the Abdomen

Canellas, R., Rosenkrantz, A. B., Taouli, B., Sala, E., Saini, S., Pedrosa, I., Wang, Z. J. & Sahani, D. V., May 1 2019, In : Radiographics : a review publication of the Radiological Society of North America, Inc. 39, 3, p. 744-758 15 p.

Research output: Contribution to journalArticle

Abdomen
Costs and Cost Analysis
Ovarian Cysts
Workflow
Physiologic Monitoring
1 Citation (Scopus)

Abdominal Sacrocolpopexy for Repair of Pelvic Organ Prolapse after Radical Cystectomy

Zimmern, P. E. & Wang, C. N., May 1 2019, In : Female Pelvic Medicine and Reconstructive Surgery. 25, 3, p. 218-221 4 p.

Research output: Contribution to journalArticle

Pelvic Organ Prolapse
Cystectomy
Hernia
Prolapse
Recurrence

Aberrant expression of oxidative stress related proteins affects the pregnancy outcome of gestational diabetes mellitus patients

Zhang, C., Yang, Y., Chen, R., Wei, Y., Feng, Y., Zheng, W., Liao, H. & Zhang, Z., Jan 1 2019, In : American Journal of Translational Research. 11, 1, p. 269-279 11 p.

Research output: Contribution to journalArticle

Pregnancy Proteins
Oxidative stress
Gestational Diabetes
Pregnancy Outcome
Medical problems
3 Citations (Scopus)

Aberrant FGFR signaling mediates resistance to CDK4/6 inhibitors in ER+ breast cancer

Formisano, L., Lu, Y., Servetto, A., Hanker, A. B., Jansen, V. M., Bauer, J. A., Sudhan, D. R., Guerrero-Zotano, A. L., Croessmann, S., Guo, Y., Ericsson, P. G., Lee, K. M., Nixon, M. J., Schwarz, L. J., Sanders, M. E., Dugger, T. C., Cruz, M. R., Behdad, A., Cristofanilli, M., Bardia, A. & 11 others, O’Shaughnessy, J., Nagy, R. J., Lanman, R. B., Solovieff, N., He, W., Miller, M., Su, F., Shyr, Y., Mayer, I. A., Balko, J. M. & Arteaga, C. L., Dec 1 2019, In : Nature communications. 10, 1, 1373.

Research output: Contribution to journalArticle

Open Access
breast
inhibitors
cancer
Breast Neoplasms
Protein-Tyrosine Kinases
Barrett Esophagus
Meta-Analysis
Case-Control Studies
Cohort Studies
Biopsy

A Better Pathway? Building Consensus and Engaging Providers with Feedback to Improve and Standardize Cancer Care

Colonna, S., Sweetenham, J., Burgon, T. B., Buys, S. S., Lynch, R., Au, T., Johnson, E., Kubal, T., Paculdo, D., Acelajado, M. C. & Peabody, J. W., Apr 2019, In : Clinical Breast Cancer. 19, 2, p. e376-e384

Research output: Contribution to journalArticle

Critical Pathways
Evidence-Based Medicine
Patient Simulation
Consensus
Breast Neoplasms

A bigenic mouse model of FSGS reveals perturbed pathways in podocytes, mesangial cells and endothelial cells

Potter, A. S., Drake, K. A., Brunskill, E. W. & Steven Potter, S., Jan 1 2019, In : PloS one. 14, 8, e0216261.

Research output: Contribution to journalArticle

Open Access
Podocytes
Mesangial Cells
Endothelial cells
endothelial cells
Endothelial Cells

A bioactive mammalian disaccharide associated with autoimmunity activates STING-TBK1-dependent immune response

Fermaintt, C. S., Sano, K., Liu, Z., Ishii, N., Seino, J., Dobbs, N., Suzuki, T., Fu, Y-X., Lehrman, M. A., Matsuo, I. & Yan, N., Dec 1 2019, In : Nature communications. 10, 1, 2377.

Research output: Contribution to journalArticle

Open Access
Disaccharides
activity (biology)
Autoimmunity
Autoimmune Diseases
Polysaccharides
1 Citation (Scopus)
R-SNARE Proteins
Vesicle-Associated Membrane Protein 2
Synaptic Transmission
Synapses
Neurotransmitter Agents
3 Citations (Scopus)

A blood-based signature of cerebrospinal fluid Aβ 1–42 status

Alzheimer’s Disease Metabolomics Consortium & Alzheimer’s Disease Neuroimaging Initiative, Dec 1 2019, In : Scientific Reports. 9, 1, 4163.

Research output: Contribution to journalArticle

Open Access
Cerebrospinal Fluid
Amyloid
Alzheimer Disease
Positron-Emission Tomography
Area Under Curve

Abnormalities of hippocampal shape and subfield volumes in medication-free patients with obsessive–compulsive disorder

Zhang, L., Hu, X., Lu, L., Li, B., Hu, X., Bu, X., Li, H., Tang, S., Yang, Y., Roberts, N., Sweeney, J. A., Gong, Q. & Huang, X., Jan 1 2019, In : Human Brain Mapping.

Research output: Contribution to journalArticle

Hippocampus
Obsessive Behavior
Parahippocampal Gyrus
Software
Magnetic Resonance Imaging

Abulcasis (936–1013): his work and contribution to orthopaedics

Markatos, K., Mavrogenis, A., Brilakis, E., Korres, D., Karamanou, M. & Chronopoulos, E., Jan 1 2019, In : International Orthopaedics.

Research output: Contribution to journalReview article

Arabic Medicine
Orthopedics
Pharmacology
Physicians
Surgical Instruments

Acalabrutinib monotherapy in patients with chronic lymphocytic leukemia who are intolerant to ibrutinib

Awan, F. T., Schuh, A., Brown, J. R., Furman, R. R., Pagel, J. M., Hillmen, P., Stephens, D. M., Woyach, J., Bibikova, E., Charuworn, P., Frigault, M. M., Hamdy, A., Izumi, R., Linghu, B., Patel, P., Wang, M. H. & Byrd, J. C., Jan 1 2019, In : Blood Advances. 3, 9, p. 1553-1562 10 p.

Research output: Contribution to journalArticle

B-Cell Chronic Lymphocytic Leukemia
Disease-Free Survival
Primary Headache Disorders
Lymphocytosis
PCI 32765

A case-based illustration of a dual-operator, dual microcatheter technique for side branch wiring

Hall, A. B., Xenogiannis, I., Burke, M. N. & Brilakis, E. S., Jan 1 2019, (Accepted/In press) In : Cardiovascular Revascularization Medicine.

Research output: Contribution to journalArticle

Percutaneous Coronary Intervention
Arterial Pressure
Pressure

A case report of phenytoin-induced eosinophilic pneumonia

Annoh Gordon, R. & Silhan, L. L., Jan 1 2019, In : Respiratory Medicine Case Reports. 28, 100922.

Research output: Contribution to journalArticle

Open Access
Pulmonary Eosinophilia
Phenytoin
Polypharmacy
Drug-Related Side Effects and Adverse Reactions
Eosinophils

A catastrophic vulvar ulcer

Prasad, S. & Mauskar, M. M., Jan 1 2019, In : American journal of obstetrics and gynecology.

Research output: Contribution to journalArticle

Ulcer
1 Citation (Scopus)

Acceptability of the Woman's Condom in a phase III multicenter open-label study

Chen, B. A., Blithe, D. L., Muraguri, G. R., Lance, A. A., Carr, B. R., Jensen, J. T., Kimble, T. D., Murthy, A. S., Schreiber, C. A., Thomas, M. A., Walsh, T. L., Westhoff, C. & Burke, A. E., Jan 1 2019, In : Contraception.

Research output: Contribution to journalArticle

Condoms
Sexually Transmitted Diseases
Pregnancy
Contraceptive Agents
Female Condoms

Accepted but Unacceptable: Peripheral IV Catheter Failure

Helm, R. E., Klausner, J. D., Klemperer, J. D., Flint, L. M. & Huang, E., May 1 2019, In : Journal of Infusion Nursing. 42, 3, p. 151-164 14 p.

Research output: Contribution to journalReview article

Catheters
Caregivers
Hand
Delivery of Health Care
4 Citations (Scopus)

Accumulation of PNPLA3 on lipid droplets is the basis of associated hepatic steatosis

BasuRay, S., Wang, Y., Smagris, E., Cohen, J. C. & Hobbs, H. H., May 7 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 19, p. 9521-9526 6 p.

Research output: Contribution to journalArticle

Open Access
Phospholipases
Liver
Triglycerides
Fatty Liver
Liver Diseases

Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Haas, B. J., Dobin, A., Li, B., Stransky, N., Pochet, N. & Regev, A., Oct 21 2019, In : Genome Biology. 20, 1, 213.

Research output: Contribution to journalArticle

Open Access
accuracy assessment
cancer
Transcriptome
neoplasms
RNA
9 Citations (Scopus)

Accuracy of the Liver Imaging Reporting and Data System in Computed Tomography and Magnetic Resonance Image Analysis of Hepatocellular Carcinoma or Overall Malignancy—A Systematic Review

van der Pol, C. B., Lim, C. S., Sirlin, C. B., McGrath, T. A., Salameh, J. P., Bashir, M. R., Tang, A., Singal, A., Costa, A. F., Fowler, K. & McInnes, M. D. F., Mar 1 2019, In : Gastroenterology. 156, 4, p. 976-986 11 p.

Research output: Contribution to journalArticle

Information Systems
Hepatocellular Carcinoma
Magnetic Resonance Spectroscopy
Tomography
Liver

Accurate vessel extraction via tensor completion of background layer in X-ray coronary angiograms

Qin, B., Jin, M., Hao, D., Lv, Y., Liu, Q., Zhu, Y., Ding, S., Zhao, J. & Fei, B., Mar 2019, In : Pattern Recognition. 87, p. 38-54 17 p.

Research output: Contribution to journalArticle

Angiography
Tensors
X rays
Radon
Visibility
15 Citations (Scopus)

A CD4+ T cell population expanded in lupus blood provides B cell help through interleukin-10 and succinate

Caielli, S., Veiga, D. T., Balasubramanian, P., Athale, S., Domic, B., Murat, E., Banchereau, R., Xu, Z., Chandra, M., Chung, C. H., Walters, L., Baisch, J., Wright, T., Punaro, M., Nassi, L. A., Stewart, K., Fuller, J., Ucar, D., Ueno, H., Zhou, J. & 2 others, Banchereau, J. & Pascual, V., Jan 1 2019, In : Nature Medicine. 25, 1, p. 75-81 7 p.

Research output: Contribution to journalLetter

T-cells
Succinic Acid
Systemic Lupus Erythematosus
Interleukin-10
Blood
1 Citation (Scopus)

Acetaminophen is Undetectable in Plasma From More Than Half of Patients Believed to Have Acute Liver Failure Due to Overdose

Acute Liver Failure Study Group, Sep 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 10, p. 2110-2116 7 p.

Research output: Contribution to journalArticle

Acute Liver Failure
Acetaminophen
Liver
Wounds and Injuries
Acetylcysteine
1 Citation (Scopus)

A chaperone for the stator units of a bacterial flagellum

Ribardo, D. A., Kelley, B. R., Johnson, J. G. & Hendrixson, D. R., Jan 1 2019, In : mBio. 10, 4, e01732-19.

Research output: Contribution to journalArticle

Open Access
Campylobacter jejuni
Flagella
Torque
Bacteria
Electric Power Supplies

A Chest-Laminated Ultrathin and Stretchable E-Tattoo for the Measurement of Electrocardiogram, Seismocardiogram, and Cardiac Time Intervals

Ha, T., Tran, J., Liu, S., Jang, H., Jeong, H., Mitbander, R., Huh, H., Qiu, Y., Duong, J., Wang, R. L., Wang, P., Tandon, A., Sirohi, J. & Lu, N., Jan 1 2019, In : Advanced Science. 1900290.

Research output: Contribution to journalArticle

Open Access
seismocardiography
electrocardiography
chest
Blood pressure
Electrocardiography
County Hospitals
Patient Safety
Surgical Flaps
Genitalia
Microsurgery

Achieving Speaker Gender Equity at the SIR Annual Scientific Meeting: The Effect of Female Session Coordinators

Ghatan, C. E., Altamirano, J., Fassiotto, M., Perez, M. G., Maldonado, Y., Josephs, S., Sze, D. Y. & Kothary, N., Nov 2019, In : Journal of Vascular and Interventional Radiology. 30, 11, p. 1870-1875 6 p.

Research output: Contribution to journalArticle

Interventional Radiology
Linear Models
2 Citations (Scopus)

Acidic Bile Salts Induce Epithelial to Mesenchymal Transition via VEGF Signaling in Non-Neoplastic Barrett's Cells

Zhang, Q. D., Agoston, A. T., Pham, T. H., Zhang, W., Zhang, X., Huo, X., Peng, S., Bajpai, M., Das, K., Odze, R. D., Spechler, S. J. & Souza, R. F., Jan 1 2019, In : Gastroenterology. 156, 1, p. 130-144.e10

Research output: Contribution to journalArticle

Epithelial-Mesenchymal Transition
Barrett Esophagus
Bile Acids and Salts
Vascular Endothelial Growth Factor A
Cadherins

A clinicopathologic and molecular analysis of fumarate hydratase-deficient renal cell carcinoma in 32 patients

Lau, H. D., Chan, E., Fan, A. C., Kunder, C. A., Williamson, S. R., Zhou, M., Idrees, M. T., Maclean, F. M., Gill, A. J. & Kao, C. S., Jan 1 2019, (Accepted/In press) In : American Journal of Surgical Pathology.

Research output: Contribution to journalArticle

Fumarate Hydratase
Renal Cell Carcinoma
Immunohistochemistry
Mutation
Leiomyomatosis
1 Citation (Scopus)

ACMT Position Statement: Buprenorphine Administration in the Emergency Department

Wax, P. M., Stolbach, A. I., Schwarz, E. S., Warrick, B. J., Wiegand, T. J. & Nelson, L. S., Jan 1 2019, In : Journal of Medical Toxicology.

Research output: Contribution to journalArticle

Open Access
Buprenorphine
Hospital Emergency Service

ACMT Position Statement: Remove the Waiver Requirement for Prescribing Buprenorphine for Opioid Use Disorder

Marino, R., Perrone, J., Nelson, L. S., Wiegand, T. J., Schwarz, E. S., Wax, P. M. & Stolbach, A. I., Jan 1 2019, (Accepted/In press) In : Journal of Medical Toxicology.

Research output: Contribution to journalComment/debate

Buprenorphine
Opioid Analgesics

A Collimator Setting Optimization Algorithm for Dual-Arc Volumetric Modulated Arc Therapy in Pancreas Stereotactic Body Radiation Therapy

Li, X., Wu, J., Palta, M., Zhang, Y., Sheng, Y., Zhang, J. & Wang, C., Jan 1 2019, In : Technology in cancer research & treatment. 18, p. 1533033819870767

Research output: Contribution to journalArticle

Open Access
Intensity-Modulated Radiotherapy
Organs at Risk
Pancreatic Neoplasms
Pancreas
Radiotherapy