Allosteric determinants in guanine nucleotide-binding proteins

Mark E. Hatley, Steve W. Lockless, Scott K. Gibson, Alfred G. Gilman, Rama Ranganathan

Research output: Contribution to journalArticle

105 Scopus citations

Abstract

Members of the G protein superfamily contain nucleotide-dependent switches that dictate the specificity of their interactions with binding partners. Using a sequence-based method termed statistical coupling analysis (SCA), we have attempted to identify the allosteric core of these proteins, the network of amino acid residues that couples the domains responsible for nucleotide binding and protein-protein interactions. One-third of the 38 residues identified by SCA were mutated in the G protein G, and the interactions of guanosine 5′-3-O-(thio)triphosphate- and GDP-bound mutant proteins were tested with both adenylyl cyclase (preferential binding to GTP- G ) and the G protein βγ subunit complex (preferential binding to GDP-G). A two-state allosteric model predicts that mutation of residues that control the equilibrium between GDP- and GTP-bound conformations of the protein will cause the ratio of affinities of these species for adenylyl cyclase and Gβγ to vary in a reciprocal fashion. Observed results were consistent with this prediction. The network of residues identified by the SCA appears to comprise a core allosteric mechanism conferring nucleotide-dependent switching; the specific features of different G protein family members are built on this core.

Original languageEnglish (US)
Pages (from-to)14445-14450
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume100
Issue numberSUPPL. 2
DOIs
StatePublished - Nov 25 2003

ASJC Scopus subject areas

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    Hatley, M. E., Lockless, S. W., Gibson, S. K., Gilman, A. G., & Ranganathan, R. (2003). Allosteric determinants in guanine nucleotide-binding proteins. Proceedings of the National Academy of Sciences of the United States of America, 100(SUPPL. 2), 14445-14450. https://doi.org/10.1073/pnas.1835919100