Bacillus tequilensis sp. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis

Joshua W. Gatson, Bruce F. Benz, Chitra Chandrasekaran, Masataka Satomi, Kasthuri Venkateswaran, Mark E. Hart

Research output: Contribution to journalArticle

60 Citations (Scopus)

Abstract

A Gram-positive, spore-forming bacillus was isolated from a sample taken from an approximately 2000-year-old shaft-tomb located in the Mexican state of Jalisco, near the city of Tequila. Tentative identification using conventional biochemical analysis consistently identified the isolate as Bacillus subtilis. DNA isolated from the tomb isolate, strain 10bT, and closely related species was used to amplify a Bacillus-specific portion of the highly conserved 16S rRNA gene and an internal region of the superoxide dismutase gene (sodAint). Trees derived from maximum-likelihood methods applied to the sodAint sequences yielded non-zero branch lengths between strain 10bT and its closest relative, whereas a comparison of a Bacillus-specific 546 bp amplicon of the 16S rRNA gene demonstrated 99% similarity with B. subtilis. Although the 16S rRNA gene sequences of strain 10bT and B. subtilis were 99% similar, PFGE of Notl-digested DNA of strain 10bT revealed a restriction profile that was considerably different from those of B. subtilis and other closely related species. Whereas qualitative differences in whole-cell fatty acids were not observed, significant quantitative differences were found to exist between strain 10bT and each of the other closely related Bacillus species examined. In addition, DNA-DNA hybridization studies demonstrated that strain 10bT had a relatedness value of less than 70% with B. subtilis and other closely related species. Evidence from the sodAint sequences, whole-cell fatty acid profiles and PFGE analysis, together with results from DNA-DNA hybridization studies, justify the classification of strain 10bT as representing a distinct species, for which the name Bacillus tequilensis sp. nov. is proposed. The type strain is 10bT (=ATCC BAA-819T = NCTC 13306T).

Original languageEnglish (US)
Pages (from-to)1475-1484
Number of pages10
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume56
Issue number7
DOIs
StatePublished - Jul 2006

Fingerprint

Bacillus (bacteria)
Bacillus subtilis
shaft
Bacillus
DNA
new species
rRNA Genes
gene
ribosomal RNA
Fatty Acids
fatty acid
nucleic acid hybridization
Spores
relatedness
Superoxide Dismutase
Names
genes
spore
superoxide dismutase
spores

ASJC Scopus subject areas

  • Microbiology
  • Applied Microbiology and Biotechnology
  • Ecology, Evolution, Behavior and Systematics
  • Immunology

Cite this

Bacillus tequilensis sp. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis. / Gatson, Joshua W.; Benz, Bruce F.; Chandrasekaran, Chitra; Satomi, Masataka; Venkateswaran, Kasthuri; Hart, Mark E.

In: International Journal of Systematic and Evolutionary Microbiology, Vol. 56, No. 7, 07.2006, p. 1475-1484.

Research output: Contribution to journalArticle

Gatson, Joshua W. ; Benz, Bruce F. ; Chandrasekaran, Chitra ; Satomi, Masataka ; Venkateswaran, Kasthuri ; Hart, Mark E. / Bacillus tequilensis sp. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis. In: International Journal of Systematic and Evolutionary Microbiology. 2006 ; Vol. 56, No. 7. pp. 1475-1484.
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abstract = "A Gram-positive, spore-forming bacillus was isolated from a sample taken from an approximately 2000-year-old shaft-tomb located in the Mexican state of Jalisco, near the city of Tequila. Tentative identification using conventional biochemical analysis consistently identified the isolate as Bacillus subtilis. DNA isolated from the tomb isolate, strain 10bT, and closely related species was used to amplify a Bacillus-specific portion of the highly conserved 16S rRNA gene and an internal region of the superoxide dismutase gene (sodAint). Trees derived from maximum-likelihood methods applied to the sodAint sequences yielded non-zero branch lengths between strain 10bT and its closest relative, whereas a comparison of a Bacillus-specific 546 bp amplicon of the 16S rRNA gene demonstrated 99{\%} similarity with B. subtilis. Although the 16S rRNA gene sequences of strain 10bT and B. subtilis were 99{\%} similar, PFGE of Notl-digested DNA of strain 10bT revealed a restriction profile that was considerably different from those of B. subtilis and other closely related species. Whereas qualitative differences in whole-cell fatty acids were not observed, significant quantitative differences were found to exist between strain 10bT and each of the other closely related Bacillus species examined. In addition, DNA-DNA hybridization studies demonstrated that strain 10bT had a relatedness value of less than 70{\%} with B. subtilis and other closely related species. Evidence from the sodAint sequences, whole-cell fatty acid profiles and PFGE analysis, together with results from DNA-DNA hybridization studies, justify the classification of strain 10bT as representing a distinct species, for which the name Bacillus tequilensis sp. nov. is proposed. The type strain is 10bT (=ATCC BAA-819T = NCTC 13306T).",
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T1 - Bacillus tequilensis sp. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis

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AU - Venkateswaran, Kasthuri

AU - Hart, Mark E.

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AB - A Gram-positive, spore-forming bacillus was isolated from a sample taken from an approximately 2000-year-old shaft-tomb located in the Mexican state of Jalisco, near the city of Tequila. Tentative identification using conventional biochemical analysis consistently identified the isolate as Bacillus subtilis. DNA isolated from the tomb isolate, strain 10bT, and closely related species was used to amplify a Bacillus-specific portion of the highly conserved 16S rRNA gene and an internal region of the superoxide dismutase gene (sodAint). Trees derived from maximum-likelihood methods applied to the sodAint sequences yielded non-zero branch lengths between strain 10bT and its closest relative, whereas a comparison of a Bacillus-specific 546 bp amplicon of the 16S rRNA gene demonstrated 99% similarity with B. subtilis. Although the 16S rRNA gene sequences of strain 10bT and B. subtilis were 99% similar, PFGE of Notl-digested DNA of strain 10bT revealed a restriction profile that was considerably different from those of B. subtilis and other closely related species. Whereas qualitative differences in whole-cell fatty acids were not observed, significant quantitative differences were found to exist between strain 10bT and each of the other closely related Bacillus species examined. In addition, DNA-DNA hybridization studies demonstrated that strain 10bT had a relatedness value of less than 70% with B. subtilis and other closely related species. Evidence from the sodAint sequences, whole-cell fatty acid profiles and PFGE analysis, together with results from DNA-DNA hybridization studies, justify the classification of strain 10bT as representing a distinct species, for which the name Bacillus tequilensis sp. nov. is proposed. The type strain is 10bT (=ATCC BAA-819T = NCTC 13306T).

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