Conformational Heterogeneity of Karyopherinβ2 Is Segmental

Ahmet E. Cansizoglu, Yuh Min Chook

Research output: Contribution to journalArticle

25 Citations (Scopus)

Abstract

Karyopherinβ2 (Kapβ2) or transportin imports numerous RNA binding proteins into the nucleus. Kapβ2 binds substrates in the cytoplasm and targets them through the nuclear pore complex, where RanGTP dissociates them in the nucleus. Here we report the 3.0 Å crystal structure of unliganded Kapβ2, which consists of a superhelix of 20 HEAT repeats. Together with previously reported structures of NLS and Ran complexes, this structure provides understanding of conformational heterogeneity that accompanies ligand binding. The Kapβ2 superhelix is divided into three major segments. Two of them (HEAT repeats 9-13 and 14-18), which constitute the substrate binding site, are rigid elements that rotate relative to each other about a flexible hinge. The third (HEAT repeats 1-8), which constitutes the Ran binding site, exhibits conformational changes throughout its length. An analogous segmental architecture is also observed in Importinβ, suggesting that it is functionally significant and may be conserved in other import karyopherins.

Original languageEnglish (US)
Pages (from-to)1431-1441
Number of pages11
JournalStructure
Volume15
Issue number11
DOIs
StatePublished - Nov 13 2007

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Karyopherins
Binding Sites
Nuclear Pore
RNA-Binding Proteins
Cytoplasm
Ligands

Keywords

  • CELLBIO
  • PROTEINS

ASJC Scopus subject areas

  • Molecular Biology
  • Structural Biology

Cite this

Conformational Heterogeneity of Karyopherinβ2 Is Segmental. / Cansizoglu, Ahmet E.; Chook, Yuh Min.

In: Structure, Vol. 15, No. 11, 13.11.2007, p. 1431-1441.

Research output: Contribution to journalArticle

Cansizoglu, Ahmet E. ; Chook, Yuh Min. / Conformational Heterogeneity of Karyopherinβ2 Is Segmental. In: Structure. 2007 ; Vol. 15, No. 11. pp. 1431-1441.
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