Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.

Helena F. Deus, Romesh Stanislaus, Carmen Behrens, Ignacio I. Wistuba, John D. Minna, Harold R. Garner, Stephen G. Swisher, Jack A. Roth, Arlene M. Correa, Bradley Broom, Kevin Coombes, Jonas S. Almeida

Research output: Contribution to journalArticle

Abstract

The Lung Cancer SPORE at University Texas MDAnderson Cancer Center and Southwestern Medical School requires the integration of heterogeneous multi-institutional sources comprising both molecular and clinical data. In this report we describe a novel method for converging domain specific experimental ontologies that relies on propagating permissions in Resource Description Framework triplets rather than the single access point of conventional relational databases. We address this challenge by combining semantic web data reposition with code distribution.

Original languageEnglish (US)
Pages (from-to)927
Number of pages1
JournalAMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium
StatePublished - 2008

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Medical Schools
Semantics
Lung Neoplasms
Databases
Research
Neoplasms

ASJC Scopus subject areas

  • Medicine(all)

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Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center. / Deus, Helena F.; Stanislaus, Romesh; Behrens, Carmen; Wistuba, Ignacio I.; Minna, John D.; Garner, Harold R.; Swisher, Stephen G.; Roth, Jack A.; Correa, Arlene M.; Broom, Bradley; Coombes, Kevin; Almeida, Jonas S.

In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium, 2008, p. 927.

Research output: Contribution to journalArticle

Deus, HF, Stanislaus, R, Behrens, C, Wistuba, II, Minna, JD, Garner, HR, Swisher, SG, Roth, JA, Correa, AM, Broom, B, Coombes, K & Almeida, JS 2008, 'Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.', AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium, pp. 927.
Deus, Helena F. ; Stanislaus, Romesh ; Behrens, Carmen ; Wistuba, Ignacio I. ; Minna, John D. ; Garner, Harold R. ; Swisher, Stephen G. ; Roth, Jack A. ; Correa, Arlene M. ; Broom, Bradley ; Coombes, Kevin ; Almeida, Jonas S. / Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center. In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2008 ; pp. 927.
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