TY - JOUR
T1 - The crystal structure of the MJ0796 ATP-binding cassette. Implications for the structural consequences of ATP hydrolysis in the active site of an ABC transporter
AU - Yuan, Yu Ren
AU - Blecker, Saul
AU - Martsinkevich, Oksana
AU - Millen, Linda
AU - Thomas, Philip J.
AU - Hunt, John F.
PY - 2001/8/24
Y1 - 2001/8/24
N2 - The crystal structure of the MJ0796 ATP-binding cassette, a member of the o228/LolD transporter family, has been determined at 2.7-Å resolution with MgADP bound at its active site. Comparing this structure with that of the ATP-bound form of the HisP ATP-binding cassette (Hung, L. W., Wang, I. X., Nikaido, K., Liu, P. Q., Ames, G. F., and Kim, S. H. (1998) Nature 396, 703-707) shows a 5-Å withdrawal of a phylogenetically invariant glutamine residue from contact with the γ-phosphate of ATP in the active site. This glutamine is located in a protein segment that links the rigid F 1-type ATP-binding core of the enzyme to an ABC transporter-specific α-helical subdomain that moves substantially away from the active site in the MgADP-bound structure of MJ0796 compared with the ATP-bound structure of HisP. A similar conformational effect is observed in the MgADP-bound structure of MJ1267 (Karpowich, N., et al. (2001) Structure, in press), establishing the withdrawal of the glutamine and the coupled outward rotation of the α-helical subdomain as consistent consequences of γ-phosphate release from the active site of the transporter. Considering this subdomain movement in the context of a leading model for the physiological dimer of cassettes present in ABC transporters indicates that it produces a modest mechanical change that is likely to play a role in facilitating nueleotide exchange out of the ATPase active site. Finally, it is noteworthy that one of the intersubunit packing interactions in the MJ0796 crystal involves antiparallel β-type hydrogen bonding interactions between the outermost β-strands in the two core β-sheets, leading to their fusion into a single extended β-sheet, a type of structural interaction that has been proposed to play a role in mediating the aggregation of β-sheet-containing proteins.
AB - The crystal structure of the MJ0796 ATP-binding cassette, a member of the o228/LolD transporter family, has been determined at 2.7-Å resolution with MgADP bound at its active site. Comparing this structure with that of the ATP-bound form of the HisP ATP-binding cassette (Hung, L. W., Wang, I. X., Nikaido, K., Liu, P. Q., Ames, G. F., and Kim, S. H. (1998) Nature 396, 703-707) shows a 5-Å withdrawal of a phylogenetically invariant glutamine residue from contact with the γ-phosphate of ATP in the active site. This glutamine is located in a protein segment that links the rigid F 1-type ATP-binding core of the enzyme to an ABC transporter-specific α-helical subdomain that moves substantially away from the active site in the MgADP-bound structure of MJ0796 compared with the ATP-bound structure of HisP. A similar conformational effect is observed in the MgADP-bound structure of MJ1267 (Karpowich, N., et al. (2001) Structure, in press), establishing the withdrawal of the glutamine and the coupled outward rotation of the α-helical subdomain as consistent consequences of γ-phosphate release from the active site of the transporter. Considering this subdomain movement in the context of a leading model for the physiological dimer of cassettes present in ABC transporters indicates that it produces a modest mechanical change that is likely to play a role in facilitating nueleotide exchange out of the ATPase active site. Finally, it is noteworthy that one of the intersubunit packing interactions in the MJ0796 crystal involves antiparallel β-type hydrogen bonding interactions between the outermost β-strands in the two core β-sheets, leading to their fusion into a single extended β-sheet, a type of structural interaction that has been proposed to play a role in mediating the aggregation of β-sheet-containing proteins.
UR - http://www.scopus.com/inward/record.url?scp=0035943735&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=0035943735&partnerID=8YFLogxK
U2 - 10.1074/jbc.M100758200
DO - 10.1074/jbc.M100758200
M3 - Article
C2 - 11402022
AN - SCOPUS:0035943735
SN - 0021-9258
VL - 276
SP - 32313
EP - 32321
JO - Journal of Biological Chemistry
JF - Journal of Biological Chemistry
IS - 34
ER -