DdTRAP

A method for sensitive and precise quantification of telomerase activity

Andrew T. Ludlow, Dawne Shelton, Woodring E. Wright, Jerry W. Shay

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Abstract

Telomerase is a cellular RNA template-dependent reverse transcriptase that adds telomere repeats to the 3′ ends of chromosomes. Telomerase is expressed almost universally in tumor cells (>85%) to maintain telomere length, thus providing the ability of tumor cells to avoid senescence and to have unlimited replication ability, one of the key hallmarks of cancer. ddTRAP (droplet digital Telomere Repeat Amplification Protocol) is a two-step assay with whole cell lysates that utilizes a telomerase-mediated primer extension followed by droplet digital PCR (ddPCR) detection of extended products. The adoptation of the TRAP assay to ddPCR has resulted in improved throughput, increased sensitivity and better repeatability of the TRAP assay. The protocol described below details our procedures for ddTRAP.

Original languageEnglish (US)
Title of host publicationMethods in Molecular Biology
PublisherHumana Press Inc.
Pages513-529
Number of pages17
DOIs
StatePublished - Jan 1 2018

Publication series

NameMethods in Molecular Biology
Volume1768
ISSN (Print)1064-3745

Fingerprint

Telomerase
Telomere
Neoplasms
Polymerase Chain Reaction
Chromosomes, Human, Pair 3
RNA-Directed DNA Polymerase
RNA

Keywords

  • Droplet digital PCR
  • Telomerase activity

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics

Cite this

Ludlow, A. T., Shelton, D., Wright, W. E., & Shay, J. W. (2018). DdTRAP: A method for sensitive and precise quantification of telomerase activity. In Methods in Molecular Biology (pp. 513-529). (Methods in Molecular Biology; Vol. 1768). Humana Press Inc.. https://doi.org/10.1007/978-1-4939-7778-9_29

DdTRAP : A method for sensitive and precise quantification of telomerase activity. / Ludlow, Andrew T.; Shelton, Dawne; Wright, Woodring E.; Shay, Jerry W.

Methods in Molecular Biology. Humana Press Inc., 2018. p. 513-529 (Methods in Molecular Biology; Vol. 1768).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ludlow, AT, Shelton, D, Wright, WE & Shay, JW 2018, DdTRAP: A method for sensitive and precise quantification of telomerase activity. in Methods in Molecular Biology. Methods in Molecular Biology, vol. 1768, Humana Press Inc., pp. 513-529. https://doi.org/10.1007/978-1-4939-7778-9_29
Ludlow AT, Shelton D, Wright WE, Shay JW. DdTRAP: A method for sensitive and precise quantification of telomerase activity. In Methods in Molecular Biology. Humana Press Inc. 2018. p. 513-529. (Methods in Molecular Biology). https://doi.org/10.1007/978-1-4939-7778-9_29
Ludlow, Andrew T. ; Shelton, Dawne ; Wright, Woodring E. ; Shay, Jerry W. / DdTRAP : A method for sensitive and precise quantification of telomerase activity. Methods in Molecular Biology. Humana Press Inc., 2018. pp. 513-529 (Methods in Molecular Biology).
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