DNA typing for class II HLA antigens with allele-specific or group-specific amplification III. Typing for 24 alleles of HLA-DP

Marcelo Fernandez-Vina, M. Elisa Moraes, Peter Stastny

Research output: Contribution to journalArticle

59 Citations (Scopus)

Abstract

The second exon of HLA-DPB includes five polymorphic segments with extensive sharing of sequences between alleles. In order to facilitate assignment of specificities in heterozygous individuals, we have used group-specific amplification of two nonoverlapping sets of DPB alleles (here called group A and group B) with especially designed primers. Group A and group B polymerase chain reaction products were hybridized with sequence-specific oligonucleotide probes generating easily recognizable patterns which defined 24 distinct HLA-DPB alleles. We also established a routine procedure for distinguishing HLA-DP homozygosity from failed amplification in one of the alleles. Our results showed that when only one allele was detected, failure of amplification had occurrured in less than 4% of the cases. DNA typing with this method correlated well with primed-lymphocyte typing for HLA-DP in the Tenth Workshop, as determined by us in assays performed on the workshop B-cell lines. Two normal panels of unrelated subjects were tested to obtain population frequencies. We conclude that this method is simple, relatively quick, and accurate. It is the method of choice for studies to determine the role of HLA-DP alleles in T cell reactions, in various diseases, and in transplantation.

Original languageEnglish (US)
Pages (from-to)60-68
Number of pages9
JournalHuman Immunology
Volume30
Issue number1
DOIs
StatePublished - 1991

Fingerprint

HLA-DP Antigens
DNA Fingerprinting
Histocompatibility Antigens Class II
HLA Antigens
Alleles
Education
Oligonucleotide Probes
Exons
B-Lymphocytes
Transplantation
Lymphocytes
T-Lymphocytes
Cell Line
Polymerase Chain Reaction
Population

ASJC Scopus subject areas

  • Immunology
  • Immunology and Allergy

Cite this

DNA typing for class II HLA antigens with allele-specific or group-specific amplification III. Typing for 24 alleles of HLA-DP. / Fernandez-Vina, Marcelo; Moraes, M. Elisa; Stastny, Peter.

In: Human Immunology, Vol. 30, No. 1, 1991, p. 60-68.

Research output: Contribution to journalArticle

Fernandez-Vina, Marcelo ; Moraes, M. Elisa ; Stastny, Peter. / DNA typing for class II HLA antigens with allele-specific or group-specific amplification III. Typing for 24 alleles of HLA-DP. In: Human Immunology. 1991 ; Vol. 30, No. 1. pp. 60-68.
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