Dominant negative GPR161 rare variants are risk factors of human spina bifida

Sung Eun Kim, Yunping Lei, Sun Hee Hwang, Bogdan J. Wlodarczyk, Saikat Mukhopadhyay, Gary M. Shaw, M. Elizabeth Ross, Richard H. Finnell

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

Spina bifida (SB) is a complex disorder of failed neural tube closure during the first month of human gestation, with a suspected etiology involving multiple gene and environmental interactions. GPR161 is a ciliary G-protein coupled receptor that regulates Sonic Hedgehog (Shh) signaling. Gpr161 null and hypomorphic mutations cause neural tube defects (NTDs) in mouse models. Herein we show that several genes involved in Shh and Wnt signaling were differentially expressed in the Gpr161 null embryos using RNA-seq analysis. To determine whether there exists an association between GPR161 and SB in humans, we performed direct Sanger sequencing on the GPR161 gene in a cohort of 384 SB patients and 190 healthy controls. We identified six rare variants of GPR161 in six SB cases, of which two of the variants were novel and did not exist in any databases. Both of these variants were predicted to be damaging by SIFT and/or PolyPhen analysis. The novel GPR161 rare variants mislocalized to the primary cilia, dysregulated Shh and Wnt signaling and inhibited cell proliferation in vitro. Our results demonstrate that GPR161 mutations cause NTDs via dysregulation of Shh and Wnt signaling in mice, and novel rare variants of GPR161 can be risk factors for SB in humans.

Original languageEnglish (US)
Pages (from-to)200-208
Number of pages9
JournalHuman Molecular Genetics
Volume28
Issue number2
DOIs
StatePublished - Jan 15 2019

Fingerprint

Spinal Dysraphism
Hedgehogs
Neural Tube Defects
Genes
Mutation
Neural Tube
Cilia
G-Protein-Coupled Receptors
Embryonic Structures
Cell Proliferation
Databases
RNA
Pregnancy

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics
  • Genetics(clinical)

Cite this

Kim, S. E., Lei, Y., Hwang, S. H., Wlodarczyk, B. J., Mukhopadhyay, S., Shaw, G. M., ... Finnell, R. H. (2019). Dominant negative GPR161 rare variants are risk factors of human spina bifida. Human Molecular Genetics, 28(2), 200-208. https://doi.org/10.1093/hmg/ddy339

Dominant negative GPR161 rare variants are risk factors of human spina bifida. / Kim, Sung Eun; Lei, Yunping; Hwang, Sun Hee; Wlodarczyk, Bogdan J.; Mukhopadhyay, Saikat; Shaw, Gary M.; Ross, M. Elizabeth; Finnell, Richard H.

In: Human Molecular Genetics, Vol. 28, No. 2, 15.01.2019, p. 200-208.

Research output: Contribution to journalArticle

Kim, SE, Lei, Y, Hwang, SH, Wlodarczyk, BJ, Mukhopadhyay, S, Shaw, GM, Ross, ME & Finnell, RH 2019, 'Dominant negative GPR161 rare variants are risk factors of human spina bifida', Human Molecular Genetics, vol. 28, no. 2, pp. 200-208. https://doi.org/10.1093/hmg/ddy339
Kim, Sung Eun ; Lei, Yunping ; Hwang, Sun Hee ; Wlodarczyk, Bogdan J. ; Mukhopadhyay, Saikat ; Shaw, Gary M. ; Ross, M. Elizabeth ; Finnell, Richard H. / Dominant negative GPR161 rare variants are risk factors of human spina bifida. In: Human Molecular Genetics. 2019 ; Vol. 28, No. 2. pp. 200-208.
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