FindGDPs: Identification of primers for labeling microbial transcriptomes for DNA microarray analysis

Robert J. Blick, Andrew T. Revel, Eric J. Hansen

Research output: Contribution to journalArticle

7 Scopus citations

Abstract

Summary: FindGDPs is a program that uses a greedy algorithm to quickly identify a set of genome-directed primers that specifically anneal to all of the open reading frames in a genome and that do not exhibit full-length complementarity to the members of another user-supplied set of nucleotide sequences.

Original languageEnglish (US)
Pages (from-to)1718-1719
Number of pages2
JournalBioinformatics
Volume19
Issue number13
DOIs
StatePublished - Sep 1 2003

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ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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