Research Output

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2019

Identification of Protein Homologs and Domain Boundaries by Iterative Sequence Alignment

Schaeffer, D. & Grishin, N. V., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 277-286 10 p. (Methods in Molecular Biology; vol. 1851).

Research output: Chapter in Book/Report/Conference proceedingChapter

Isotopic Labeling of Eukaryotic Membrane Proteins for NMR Studies of Interactions and Dynamics

Dikiy, I., Clark, L. D., Gardner, K. H. & Rosenbaum, D. M., Jan 1 2019, Methods in Enzymology. Wand, A. J. (ed.). Academic Press Inc., p. 37-65 29 p. (Methods in Enzymology; vol. 614).

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations
2017

Reconstitution of TCR signaling using supported lipid bilayers

Su, X., Ditlev, J. A., Rosen, M. K. & Vale, R. D., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 65-76 12 p. (Methods in Molecular Biology; vol. 1584).

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

The Human Orexin/Hypocretin receptor crystal structures

Yin, J. & Rosenbaum, D. M., 2017, Current Topics in Behavioral Neurosciences. Springer Verlag, Vol. 33. p. 1-16 16 p. (Current Topics in Behavioral Neurosciences; vol. 33).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations
2016

Eukaryotic Ribosome Assembly and Export

Panse, V. G. & Weirich, C. S., Jan 1 2016, Functional Cell Biology. Elsevier Inc., Vol. 3. p. 297-306 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

In Silico Chemogenomics Knowledgebase and Computational System Neuropharmacology Approach for Cannabinoid Drug Research

Xie, X. Q., Wang, L., Wang, J., Xie, Z., Yang, P. & Ouyang, Q., May 13 2016, General Processes and Mechanisms, Prescription Medications, Caffeine and Areca, Polydrug Misuse, Emerging Addictions and Non-Drug Addictions. Elsevier Inc., Vol. 3. p. 183-195 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations
2015

Calculations and Publication-Quality Illustrations for Analytical Ultracentrifugation Data

Brautigam, C. A., 2015, Methods in Enzymology. Academic Press Inc., Vol. 562. p. 109-133 25 p. (Methods in Enzymology; vol. 562).

Research output: Chapter in Book/Report/Conference proceedingChapter

150 Scopus citations
2014

Biochemical reconstitution of the WAVE regulatory complex

Chen, B., Padrick, S. B., Henry, L. & Rosen, M. K., Jan 1 2014, Reconstituting the Cytoskeleton. Academic Press Inc., p. 55-72 18 p. (Methods in Enzymology; vol. 540).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

PROMALS3D: Multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information

Pei, J. & Grishin, N. V., 2014, Methods in Molecular Biology. Vol. 1079. p. 263-271 9 p. (Methods in Molecular Biology; vol. 1079).

Research output: Chapter in Book/Report/Conference proceedingChapter

PROMALS3D: Multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information

Pei, J. & Grishin, N. V., 2014, Methods in Molecular Biology. Humana Press Inc., Vol. 1079. p. 263-271 9 p. (Methods in Molecular Biology; vol. 1079).

Research output: Chapter in Book/Report/Conference proceedingChapter

113 Scopus citations
2013

Everything happens at once - Deconvolving systematic effects in X-ray data processing

Borek, D. & Otwinowski, Z., May 8 2013, Advancing Methods for Biomolecular Crystallography. Randy, R., Urzhumtsev, A., Alexandre, U. & Lunin, V. (eds.). p. 105-112 8 p. (NATO Science for Peace and Security Series A: Chemistry and Biology).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Evolution-based design of proteins

Reynolds, K. A., Russ, W. P., Socolich, M. & Ranganathan, R., 2013, Methods in Protein Design. Academic Press Inc., p. 213-235 23 p. (Methods in Enzymology; vol. 523).

Research output: Chapter in Book/Report/Conference proceedingChapter

23 Scopus citations

Measurement and analysis of in vitro actin polymerization

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Methods in Molecular Biology. Humana Press Inc., Vol. 1046. p. 273-293 21 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceedingChapter

27 Scopus citations

Purification of Arp2/3 complex from saccharomyces cerevisiae

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Methods in Molecular Biology. Humana Press Inc., Vol. 1046. p. 251-271 21 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

Purification of native Arp2/3 complex from bovine thymus

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Methods in Molecular Biology. Humana Press Inc., Vol. 1046. p. 231-250 20 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Vacuoles

Stefan, C. J., Henne, W. M. & Emr, S. D., Feb 15 2013, Encyclopedia of Biological Chemistry: Second Edition. Elsevier Inc., p. 331-336 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2010

Mechanistic features of cell-surface adhesion receptors

Almo, S. C., Bresnick, A. R. & Zhang, X., Dec 1 2010, Handbook of Cell Signaling, 2/e. Elsevier Inc., Vol. 1. p. 63-69 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Structure and Modeling of GPCRs: Implications for Drug Discovery

Reynolds, K. A., Katritch, V. & Abagyan, R., Jul 15 2010, GPCR Molecular Pharmacology and Drug Targeting: Shifting Paradigms and New Directions. John Wiley and Sons, p. 385-433 49 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

The γ2 adrenergic receptor as a model for g-protein-coupled receptor structure and activation by diffusible hormones

Rosenbaum, D. M., Rasmussen, S. G. F. & Kobilka, B. K., Dec 1 2010, Handbook of Cell Signaling, 2/e. Elsevier Inc., Vol. 1. p. 163-169 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2009

Crystal structures of the β2-adrenergic receptor

Weis, W. I., Rosenbaum, D. M., Rasmussen, S. G. F., Choi, H. J., Thian, F. S., Kobilka, T. S., Yao, X. J., Day, P. W., Parnot, C., Fung, J. J., Ratnala, V. R. P., Kobilka, B. K., Cherezov, V., Hanson, M. A., Kuhn, P., Stevens, R. C., Edwards, P. C., Schertler, G. F. X., Burghammer, M., Sanishvili, R. & 3 others, Fischetti, R. F., Masood, A. & Rohrer, D. K., May 4 2009, From Molecules to Medicines: Structure of Biological Macromolecules and Its Relevance in Combating New Diseases and Bioterrorism. Sussman, J. (ed.). p. 217-230 14 p. (NATO Security through Science Series C: Environmental Security).

Research output: Chapter in Book/Report/Conference proceedingChapter

SNAREs

Rizo-Rey, J., Jan 1 2009, Encyclopedia of Neuroscience. Elsevier Ltd, p. 11-19 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

The Regulation of Axonemal Bending

Wirschell, M., Nicastro, D., Porter, M. E. & Sale, W. S., Dec 1 2009, The Chlamydomonas Sourcebook 3-Vol set. Elsevier Inc., Vol. 3. p. 253-282 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

13 Scopus citations
2007

Electron Microscopy of Microtubule-Based Cytoskeletal Machinery

Hoenger, A. & Nicastro, D., Feb 28 2007, Cellular Electron Microscopy. McIntosh, J. R. (ed.). 79 ed. p. 437-462 26 p. (Methods in Cell Biology; vol. 2007, no. 79).

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations
2006

A putative RNA-interference-based immune system in prokaryotes: The epitome of prokaryotic genomic diversity

Koonin, E. V., Makarova, K. S., Grishin, N. V. & Wolf, Y. I., Jan 1 2006, Prokaryotic Diversity: Mechanisms and Significance: Published for the Society for General Microbiology. Cambridge University Press, p. 39-64 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations
2005

Microtubule Nucleation

Moritz, M., Rice, L. M. & Agard, D. A., Jun 17 2005, Centrosomes in Development and Disease. Wiley Blackwell, p. 27-41 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations
2003

C2-Domains in Ca2+-Signaling

Südhof, T. C. & Rizo-Rey, J., Nov 7 2003, Handbook of Cell Signaling. Elsevier Inc., Vol. 2-3. p. 95-100 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Mechanistic Features of Cell-Surface Adhesion Receptors

Almo, S. C., Bresnick, A. R. & Zhang, X., Nov 7 2003, Handbook of Cell Signaling. Elsevier Inc., Vol. 1-3. p. 71-77 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter